PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022740150.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 327aa MW: 36666.4 Da PI: 7.0042

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022740150.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	38.7	1.7e-12	127	177	1	54
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +r+ h ++Er+RR+++N+ ++ Lr+++P++ + ++ + a+i A++++k+L XP_022740150.1 127 QRMIHIAVERNRRRQMNDYLAVLRSMMPTS---YVQRGDQASIIGGAINFVKEL 177 6999************************...9***************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 327 aa Download sequence
MTLEAVVFQQ DHFSYGCKDF YSFGEGSGTC SYDFGFQQQE EKAYCNTEET LAKSRGFGFS 60 ATWDTSSSPS LMVQQPLKEW DSNSSSPDNR FTNGGFSAVE PPPAAPSCRR KRRRTKSVKN 120 REEIENQRMI HIAVERNRRR QMNDYLAVLR SMMPTSYVQR GDQASIIGGA INFVKELDHL 180 IQSLEARKRM EKRSDNSSLS LLFSDFFSIP QHSTSSNGIH LSSAAAPDKS MAEKLPSSVA 240 DVEVTMVESH ANLKILAKRH PKQLLKMVTG LHSLGLLVLH LNLTSVENMV LYSLSVRVED 300 NCLLTTVNEI ATAVYEMVDR FQEEAAA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	110	114	RKRRR
2	110	115	RKRRRT
3	128	139	RMIHIAVERNRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72210.1	5e-64	bHLH family protein