PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022739971.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

Trihelix

Protein Properties

Length: 455aa MW: 52896.3 Da PI: 6.3608

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022739971.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	92.7	3.8e-29	39	123	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW++qe+laL+++r+em+ ++r++ k+plWe+vs+k++e g++r++k+Ckek+en+ k+++++keg+++r+++ +++++f+qlea XP_022739971.1 39 RWPRQETLALLKIRSEMDVAFRESDVKAPLWEQVSRKLAELGYNRNAKKCKEKFENIYKYHRRTKEGRSGRSND--KNYRFFEQLEA 123 8******************************************************************98544..47*****85 PP
2	trihelix	104.9	5.9e-33	290	375	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW+k+ev aLi++r +++ ++++++ k+plWee+s +m++ g+ rs+k+Ckekwen+nk++k++ke++kkr +e+s+tcpyf+ql+a XP_022739971.1 290 RWPKDEVEALIRLRANLDLQYQDNAPKGPLWEEISTAMKKLGYDRSAKRCKEKWENMNKYFKRVKESNKKR-PEDSKTCPYFHQLDA 375 8*******************************************************************8.99*********85 PP

Sequence ? help Back to Top
Protein Sequence Length: 455 aa Download sequence
MENSNFPKNN TIADSVILVN EEEVEVKNEQ SERNFAGSRW PRQETLALLK IRSEMDVAFR 60 ESDVKAPLWE QVSRKLAELG YNRNAKKCKE KFENIYKYHR RTKEGRSGRS NDKNYRFFEQ 120 LEALDHHPSL GVIHDAIPIS TRNPALNFYE NSTSTTSSSS KEPELDGTRK KKRKLMNFFE 180 SLMREVMEEQ ENLQKKFIEA IEKSEQDRMA REEAWKMQEL ARIKRERELL MQERSIAATK 240 DAAVLAFLQK FLDQTTTVQL PETPFPVEKV AERQEYSNGS ESYMHLSTTR WPKDEVEALI 300 RLRANLDLQY QDNAPKGPLW EEISTAMKKL GYDRSAKRCK EKWENMNKYF KRVKESNKKR 360 PEDSKTCPYF HQLDALYKGK TKRVDGSVNS GYEVKPEELL MHMIGVQGER PHQESTTEDG 420 ESENADLNQE ENGNTEEGDA SQIVANDRSP MAIIG

Sequence ? help Back to Top

Protein Sequence Length: 455 aa Download sequence

MENSNFPKNN TIADSVILVN EEEVEVKNEQ SERNFAGSRW PRQETLALLK IRSEMDVAFR  60
ESDVKAPLWE QVSRKLAELG YNRNAKKCKE KFENIYKYHR RTKEGRSGRS NDKNYRFFEQ  120
LEALDHHPSL GVIHDAIPIS TRNPALNFYE NSTSTTSSSS KEPELDGTRK KKRKLMNFFE  180
SLMREVMEEQ ENLQKKFIEA IEKSEQDRMA REEAWKMQEL ARIKRERELL MQERSIAATK  240
DAAVLAFLQK FLDQTTTVQL PETPFPVEKV AERQEYSNGS ESYMHLSTTR WPKDEVEALI  300
RLRANLDLQY QDNAPKGPLW EEISTAMKKL GYDRSAKRCK EKWENMNKYF KRVKESNKKR  360
PEDSKTCPYF HQLDALYKGK TKRVDGSVNS GYEVKPEELL MHMIGVQGER PHQESTTEDG  420
ESENADLNQE ENGNTEEGDA SQIVANDRSP MAIIG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	170	175	KKKRKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76880.1	6e-76	Trihelix family protein