PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022739880.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | bHLH | ||||||||
Protein Properties | Length: 237aa MW: 27086.8 Da PI: 8.8561 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 30.9 | 4.9e-10 | 86 | 133 | 4 | 54 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 a+ rE+ RR+r+N++f L ++l + +s + +K+ iL A++ + +L XP_022739880.1 86 AKACREKLRRERLNERFLDLSSILEPG---RSVRTDKSVILDDAIKVLTQL 133 6789**********************9...9***************99998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 237 aa Download sequence |
MQISKKKRKN WSVEVVKKMD SIEDWDFLDY NFINEYTSPD LLLPNNSSGR EVEFSSGNVV 60 HQEKEFADRD CSRKRGRGGA CSKPGAKACR EKLRRERLNE RFLDLSSILE PGRSVRTDKS 120 VILDDAIKVL TQLRTETQEL KETNEKLSEE IKCLKAEKNE LREEKLLLKA NKEKMEQQLK 180 TTTIPPAGYL PAHPAAYHPG ANKMAVFPGY GLVPMWQYLP PSARDTSQDH ELRPPAA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G14410.2 | 2e-56 | bHLH family protein |