PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022739532.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

AP2

Protein Properties

Length: 673aa MW: 75065.2 Da PI: 7.1565

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022739532.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	50.9	3.9e-16	323	382	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d ++ g ++ ++++lg ++ +e+Aa+a++ a++k++g XP_022739532.1 323 SQYRGVTRHRWTGRYEAHLWDnSCKkEGqsRKgRQVYLGGYDMEEKAARAYDLAALKYWG 382 78*****************988886678446***********************98 PP
2	AP2	45.6	1.7e-14	427	476	3	55
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g XP_022739532.1 427 YRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 476 9*************988532...5**********************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 673 aa Download sequence
MKSMSNDDNN NNNSNNTNWL GFSLSPHLKM EVSNQDPHHH TQSASDAAGV TTAVPASFFQ 60 SPSHLNYGLY YGVEGENGGL YSHFPVMPLK SDGSLCLMEA LGRSQPQAMV PTSTPKLEDF 120 FGGAAMGAHH YESSDREAMA LSLDSMYYHQ NPNQEHNNQN CLEHLQQSSR QQHQQQFQVQ 180 QYQYHSGYRN QEMLLGEEAK EAHLTDCNLQ LPTMANDGAP GMKHWVSRNY STEHAMHHKM 240 IGRMGDNGAE SGFIGAMAYG DLQSLSLSMS PGSQSSCVTG SQQISPTATD YAAMQTKKRG 300 PEKVDQKQIV HRKSIDTFGQ RTSQYRGVTR HRWTGRYEAH LWDNSCKKEG QSRKGRQVYL 360 GGYDMEEKAA RAYDLAALKY WGPSTHINFS LENYQKELEE MKNMTRQEYV AHLRRKSSGF 420 SRGASMYRGV TRHHQHGRWQ ARIGRVAGNK DLYLGTFSTQ EEAAEAYDIA AIKFRGVNAV 480 TNFDITRYAV ERIMASNTLL TGELARRNKD IAPGNDAISH NLLTDNSNGE TNISPKNNEV 540 QPDWKMVLYQ SSEQQLEQKQ PNIIDSYKTQ TFSLAPENMV GIDTISSGQR EVDDSSKIGT 600 HLSNASSLVT SLSSSREGSP DRSSLPMPFA MPPPSSKLFT SSANTVNSWI PSAQLRPALS 660 MPHMPVFAAW TDA

Sequence ? help Back to Top

Protein Sequence Length: 673 aa Download sequence

MKSMSNDDNN NNNSNNTNWL GFSLSPHLKM EVSNQDPHHH TQSASDAAGV TTAVPASFFQ  60
SPSHLNYGLY YGVEGENGGL YSHFPVMPLK SDGSLCLMEA LGRSQPQAMV PTSTPKLEDF  120
FGGAAMGAHH YESSDREAMA LSLDSMYYHQ NPNQEHNNQN CLEHLQQSSR QQHQQQFQVQ  180
QYQYHSGYRN QEMLLGEEAK EAHLTDCNLQ LPTMANDGAP GMKHWVSRNY STEHAMHHKM  240
IGRMGDNGAE SGFIGAMAYG DLQSLSLSMS PGSQSSCVTG SQQISPTATD YAAMQTKKRG  300
PEKVDQKQIV HRKSIDTFGQ RTSQYRGVTR HRWTGRYEAH LWDNSCKKEG QSRKGRQVYL  360
GGYDMEEKAA RAYDLAALKY WGPSTHINFS LENYQKELEE MKNMTRQEYV AHLRRKSSGF  420
SRGASMYRGV TRHHQHGRWQ ARIGRVAGNK DLYLGTFSTQ EEAAEAYDIA AIKFRGVNAV  480
TNFDITRYAV ERIMASNTLL TGELARRNKD IAPGNDAISH NLLTDNSNGE TNISPKNNEV  540
QPDWKMVLYQ SSEQQLEQKQ PNIIDSYKTQ TFSLAPENMV GIDTISSGQR EVDDSSKIGT  600
HLSNASSLVT SLSSSREGSP DRSSLPMPFA MPPPSSKLFT SSANTVNSWI PSAQLRPALS  660
MPHMPVFAAW TDA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37750.1	1e-133	AP2 family protein