PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022739531.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

AP2

Protein Properties

Length: 674aa MW: 75152.3 Da PI: 7.1565

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022739531.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	50.9	3.9e-16	323	382	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d ++ g ++ ++++lg ++ +e+Aa+a++ a++k++g XP_022739531.1 323 SQYRGVTRHRWTGRYEAHLWDnSCKkEGqsRKgRQVYLGGYDMEEKAARAYDLAALKYWG 382 78*****************988886678446***********************98 PP
2	AP2	39.4	1.5e-12	427	477	3	55
AP2 3 ykGV.rwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GV r +++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g XP_022739531.1 427 YRGVtRSHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 477 9*988999***988532...5**********************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 674 aa Download sequence
MKSMSNDDNN NNNSNNTNWL GFSLSPHLKM EVSNQDPHHH TQSASDAAGV TTAVPASFFQ 60 SPSHLNYGLY YGVEGENGGL YSHFPVMPLK SDGSLCLMEA LGRSQPQAMV PTSTPKLEDF 120 FGGAAMGAHH YESSDREAMA LSLDSMYYHQ NPNQEHNNQN CLEHLQQSSR QQHQQQFQVQ 180 QYQYHSGYRN QEMLLGEEAK EAHLTDCNLQ LPTMANDGAP GMKHWVSRNY STEHAMHHKM 240 IGRMGDNGAE SGFIGAMAYG DLQSLSLSMS PGSQSSCVTG SQQISPTATD YAAMQTKKRG 300 PEKVDQKQIV HRKSIDTFGQ RTSQYRGVTR HRWTGRYEAH LWDNSCKKEG QSRKGRQVYL 360 GGYDMEEKAA RAYDLAALKY WGPSTHINFS LENYQKELEE MKNMTRQEYV AHLRRKSSGF 420 SRGASMYRGV TRSHHQHGRW QARIGRVAGN KDLYLGTFST QEEAAEAYDI AAIKFRGVNA 480 VTNFDITRYA VERIMASNTL LTGELARRNK DIAPGNDAIS HNLLTDNSNG ETNISPKNNE 540 VQPDWKMVLY QSSEQQLEQK QPNIIDSYKT QTFSLAPENM VGIDTISSGQ REVDDSSKIG 600 THLSNASSLV TSLSSSREGS PDRSSLPMPF AMPPPSSKLF TSSANTVNSW IPSAQLRPAL 660 SMPHMPVFAA WTDA

Sequence ? help Back to Top

Protein Sequence Length: 674 aa Download sequence

MKSMSNDDNN NNNSNNTNWL GFSLSPHLKM EVSNQDPHHH TQSASDAAGV TTAVPASFFQ  60
SPSHLNYGLY YGVEGENGGL YSHFPVMPLK SDGSLCLMEA LGRSQPQAMV PTSTPKLEDF  120
FGGAAMGAHH YESSDREAMA LSLDSMYYHQ NPNQEHNNQN CLEHLQQSSR QQHQQQFQVQ  180
QYQYHSGYRN QEMLLGEEAK EAHLTDCNLQ LPTMANDGAP GMKHWVSRNY STEHAMHHKM  240
IGRMGDNGAE SGFIGAMAYG DLQSLSLSMS PGSQSSCVTG SQQISPTATD YAAMQTKKRG  300
PEKVDQKQIV HRKSIDTFGQ RTSQYRGVTR HRWTGRYEAH LWDNSCKKEG QSRKGRQVYL  360
GGYDMEEKAA RAYDLAALKY WGPSTHINFS LENYQKELEE MKNMTRQEYV AHLRRKSSGF  420
SRGASMYRGV TRSHHQHGRW QARIGRVAGN KDLYLGTFST QEEAAEAYDI AAIKFRGVNA  480
VTNFDITRYA VERIMASNTL LTGELARRNK DIAPGNDAIS HNLLTDNSNG ETNISPKNNE  540
VQPDWKMVLY QSSEQQLEQK QPNIIDSYKT QTFSLAPENM VGIDTISSGQ REVDDSSKIG  600
THLSNASSLV TSLSSSREGS PDRSSLPMPF AMPPPSSKLF TSSANTVNSW IPSAQLRPAL  660
SMPHMPVFAA WTDA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37750.1	1e-131	AP2 family protein