PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022739468.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MIKC_MADS
Protein Properties Length: 224aa    MW: 25721.1 Da    PI: 9.8948
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022739468.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF96.98.6e-31958150
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
                    kri n++nrqvtf+kRrng+lKKA+ELSvLCdaeva+i+fss+g+lyey+
  XP_022739468.1  9 KRIANTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYA 58
                    79***********************************************8 PP
2K-box109.24.4e-36791736100
           K-box   6 gksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100
                       s++ea+++ +qqe++kL+++i+  q+ +Rh+lGe+L+sL+ keL++Le +Lek++++iRskKnell+++ie +qk+e elq++n +Lr+k++e
  XP_022739468.1  79 PGSVAEANTQFYQQEATKLRRQIRDVQNMNRHILGESLGSLTSKELKNLEGRLEKGISRIRSKKNELLFAEIEFMQKREVELQNDNLYLRAKIAE 173
                     44599***************************************************************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    
MGRGKIEIKR IANTTNRQVT FCKRRNGLLK KAYELSVLCD AEVALIVFSS RGRLYEYANN  60
SVRATIDRYK KACADASNPG SVAEANTQFY QQEATKLRRQ IRDVQNMNRH ILGESLGSLT  120
SKELKNLEGR LEKGISRIRS KKNELLFAEI EFMQKREVEL QNDNLYLRAK IAENERAQQQ  180
STLIQGSVYQ TETSQPYNRN FLPVNLLEPS HDYSNQDQTA LQLV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58780.11e-129MIKC_MADS family protein