PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022739367.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family C3H
Protein Properties Length: 977aa    MW: 108378 Da    PI: 8.8277
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022739367.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH28.23.2e-09202223325
                     S---SGGGGTS--TTTTT-SS-S CS
         zf-CCCH   3 telCrffartGtCkyGdrCkFaH 25 
                     t lC++f++ G C++G++C+F H
  XP_022739367.1 202 TQLCKDFMA-GRCRRGSQCHFLH 223
                     78*******.************* PP

Sequence ? help Back to Top
Protein Sequence    Length: 977 aa     Download sequence    
MENVIGFGGR RDHTAFIRIS ATGEMSGSRK RGSKWDSKEE RQHSLENVRD SAWPAKAGMS  60
FHDRESEHGY FSPEVGRNCN KWSVAKASDM MKSKHGLPSR ESLPGSRGGQ KDDNINVDCV  120
KNWKTTTLWD GDETYSMKMS PGLEDWRQQN RHHSPKSDWS RSYRSRSWSR SRSRSRSRSP  180
VRGIRRQSGF HERTRSRSGV STQLCKDFMA GRCRRGSQCH FLHQDIQSDE DGWDNRQKRG  240
GMSKYFTPND GKDYLIKSGR STDCCADYLK GNCRKGASCR FAHDGASDGF SRGSINEVSR  300
ERENDKRNRV TTPERHVEHE ARRSMDVPCK YFAAGNCRSG KYCRFSHHGE ARASPERRSR  360
GDRGGWGQTS VSVDKLLGGA KSRDADASFN VEKSWNAPKW SNANASNEGE KSWSGPKWGD  420
ADASNEVDKS WTGSKWSDTG AYLGANKLNK ETNGKMGASE PRFSDWSLDD RWQHDFDASG  480
KNGESNVHYK TVDIDKDEAI PRKIENAGVS MGAGESLGDM EMSPEWNYGI HSSVKIQHSR  540
SSKSTPVDSS VPAQEKNMTK DASGWVHDEL AASQPLSTEK SNFQQDHMMR GSSAVALPCD  600
SNDISRNTSV SRIDLNFSTN NLSMPSFDQP GPSSSSLPYS SLGAVGQSQV AIPSNEVNMK  660
VMQNSLLFQE EKPSNKLNIG DTNLLPGNSG TQSTQKMVSS EQLTQLTNLS ASLAQLFGKG  720
QQLPQLHVAL TAHDPMQVTS FPNSGGPVEP DSVPTVQPGQ DIIFQEQYDP ISDSIGPVKT  780
QDTNTKALVI SVHPVSQKNT TDGKPELSTN KLLSSSHVDS TNGGDFPNDH SSKREPDFDS  840
HKLNQLKPLA SSEVTKENGV EETKKAEDEN KNGPSENIDA EDRTDEGKKS KDGKGIRAFK  900
FALVEFVKDL LKPTWKEGQI GKEAYKNIVK KVVDKVTATM QGTNIPQTPE KIDQYLSFSK  960
PKLSKLVQAY VEKFQKS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1170178RSRSRSRSR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33835.11e-18C3H family protein