PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022739360.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family FAR1
Protein Properties Length: 818aa    MW: 94276.4 Da    PI: 6.7437
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022739360.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR175.51.1e-23138225190
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                     k+Y +YA   GFs+rk+  +ks+ ng +++r+++C+++g+r +++++  + r++r+etrtgC a++++ ++ +gk++vt++e+ HnHe++
  XP_022739360.1 138 KYYGRYAVLEGFSIRKDFVNKSRVNGAVVSRRYTCYRQGYRPSKHNS--NVRKPRQETRTGCLAHMTIARQPNGKFRVTNFETRHNHEFV 225
                     69****************************************99988..99*************************************86 PP

2FAR189.54.7e-28273361190
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                     +fYn+YA +vGFsvrk++ ++sk +g + +r+f+C +eg+r+++k++  + +r+r+etr+gC a+l++ +++dgk++vt++e++HnHel+
  XP_022739360.1 273 EFYNTYAGRVGFSVRKDYVNRSKIDGAVASRRFTCFREGFRQKDKRD-LNIKRPRKETRIGCLAQLVICRQSDGKYRVTHFEEKHNHELV 361
                     6*******************************************999.999*************************************97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 818 aa     Download sequence    
MDRSDPDILT HGQNLGIHNE LQESNQVDID VDQEYKSLEP SAAEKSQEAA ESESCSQSPN  60
ASSVEKSDVE INGAECLAPQ VPLVNKCEMD VDGEQESQSP NPLSIDALGS RVSFKDEEDI  120
FVVPAVGVEF ESEEHAYKYY GRYAVLEGFS IRKDFVNKSR VNGAVVSRRY TCYRQGYRPS  180
KHNSNVRKPR QETRTGCLAH MTIARQPNGK FRVTNFETRH NHEFVNPSTA HLLPSQKRLT  240
FAEAVEADLA SSSGRDGVPK LGMAFESEDH AYEFYNTYAG RVGFSVRKDY VNRSKIDGAV  300
ASRRFTCFRE GFRQKDKRDL NIKRPRKETR IGCLAQLVIC RQSDGKYRVT HFEEKHNHEL  360
VAPCRVRMLR SQKHLAAPQV AEGNALEGYK IQEESACEVS CNSIGDCVDH GYDPIDLRSK  420
LSSKRSREMR EGEAERIQQH FQSKKMKNPS FFYAMQLDAE NQIANIFWAD AKMVMDYSDF  480
GDVLCFDTTY RLHKDCRLFS PFVGVNHHKQ MVIFGAALLY DETVDSFKWL FQKFLEAMSG  540
KKPKTILTDQ DAIVSEAINS VFPDINQRMC VWHVYQSALK QLSHLFVGSL SFVNDLSSCF  600
FDHEEEEDFI AAWNLMLDVH GLWDNEWLNK IFESREQWAI AYKRHIFSAD LKSAQLRESF  660
IVTLKKYLKP ESDVLSFFKH LGKGVNDWHY KELEANYDMR QNMPKLMGDV ILLKHARDAY  720
TPRIFELFQQ EYETCLNIVV NQCVESEKLF EYKVSIYGQP REYSVSYNLS DNTVFCSCKK  780
FEFMGVLCSH ALKVLDYRNI RLLPSHYILK RWTRDARA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.11e-124FAR1 family protein