PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022739082.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family ARF
Protein Properties Length: 851aa    MW: 94357.7 Da    PI: 6.516
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022739082.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B374.71.1e-23163264199
                     EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 
                     f+k+lt sd++++g +++ +++a+e+      + + + +++l+ +d++g++W++++i+r++++r++l++GW+ Fv++++L +gD ++F   + ++
  XP_022739082.1 163 FCKTLTASDTSTHGGFSVLRRHADEClppldmSRQ-PPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFL--RGEN 254
                     99*****************************7333.34459************************************************..4499 PP

                     E..EEEEE-S CS
              B3  90 felvvkvfrk 99 
                     +el+v+v+r+
  XP_022739082.1 255 GELRVGVRRA 264
                     99*****985 PP
2Auxin_resp118.17.4e-39289371183
      Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                     a+ha +++++F+v+Y+Pr+s++eF+v+++++++++k+++s+GmRfkm+fe+e+++e+r++Gt+vg++d+dp rW++SkWr+Lk
  XP_022739082.1 289 AWHAYTSRTIFTVYYKPRTSPAEFIVPFDQYMESVKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEDADPKRWQDSKWRCLK 371
                     79*******************************************************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 851 aa     Download sequence    
MTTTSEVSIK GNCVNGRGGE SFSSGYSEPN DARNTMEGQN CPSTTRTAPV RDPETALYTE  60
LWHACAGPLV TVPREGERVF YFPQGHIEQV EASTNQVADQ QMPVYNLPSK ILCRVINVQL  120
KAEPDTDEVF AQVTLLPEPI QDENNVGKEA PIPQPSRFQV HSFCKTLTAS DTSTHGGFSV  180
LRRHADECLP PLDMSRQPPT QELVAKDLHG NEWRFRHIFR GQPRRHLLQS GWSVFVSSKR  240
LVAGDAFIFL RGENGELRVG VRRALRQQGN VPSSVISSHS MHLGVLATAW HAYTSRTIFT  300
VYYKPRTSPA EFIVPFDQYM ESVKNNYSIG MRFKMRFEGE EAPEQRFTGT IVGIEDADPK  360
RWQDSKWRCL KVRWDETSTV PRPERVSPWK IEPALSLPAL NPLPMPRPKR PRSNAVPSSP  420
DSSVLTREGS SKVNVDPSPA SGFSRVLQGQ EFSTLRGNFG ESNESDTAEK SAMWPPSVDD  480
EKTDVVSVSR RFGSENWMPS GWHEPTYTDL LSGFGSNADS SHGYSPSLVD QTLLAGNLMR  540
KQSLDQEGKL GSRFLIPSGL SLKLADTNSK LPVQGSDVSH ARGNGRFSGF GDYPILQGHR  600
IEPSYGNWLM TAPTSSHYEN PVHSRDLLPK TSLVQEHENG KSREGNYKLF GIPLFSNSVA  660
SEPPVSHINA LAKPVGHMQA ASHNVCAFES DPKSEKSKVS QLADDLSSFN EKEKVIQLGQ  720
SRTPSASTRS CTKVHKQGIV LGRSVDLTKF NNYDELIGEL DQLFEFGGEL MAPKKNWLVV  780
YTDDEGDMML VGDDPWEEFC AMVRKIGIYT KEEVQKMKPG SSSKGEDNPV SVEGLDAKEV  840
KCPSTCSAEN S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62000.30.0ARF family protein