PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022738804.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 1162aa MW: 131752 Da PI: 8.1388

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022738804.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	32.5	2.1e-10	436	481	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r++WT+eEd+ l+ v++ G g+W Ia +g +Rt+ qc r+q XP_022738804.1 436 RNPWTAEEDKNLLLIVQEKGIGNWFDIAVSLGSNRTPFQCLARYQR 481 79******************************************96 PP
2	Myb_DNA-binding	43	1.1e-13	490	533	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 WT+eEd++l av+ +G +W ++a+t+ gRt+ qc +rw k XP_022738804.1 490 REWTEEEDDQLRIAVEVFGECDWQSVASTLK-GRTGTQCSNRWKK 533 68**************************9.*********98 PP
3	Myb_DNA-binding	47.2	5e-15	543	586	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 grWT Ed+ l+ av ++G+++Wk+Ia+ ++ gRt qc++rw + XP_022738804.1 543 GRWTHAEDKYLKVAVMLFGPKNWKKIAEVVP-GRTQVQCRERWVN 586 8****************************.*********87 PP
4	Myb_DNA-binding	42.8	1.2e-13	597	636	4	45
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 WT+eEd++l a++++G W++Ia +m Rt++qc rw XP_022738804.1 597 WTKEEDLRLEAAIEEHGYC-WSKIATCML-SRTDNQCWRRWK 636 ***************99.****9.*********7 PP

Sequence ? help Back to Top
Protein Sequence Length: 1162 aa Download sequence
MSLSDQYDSG EEVVDDDELS SSEDGDGFDE DMEALKKACL RTGTDLNDLQ ITVADKDLPS 60 TAGAVASASA ASADSGSEDD LELFRSIRSR FALSEDVCEP LSMKPLCTLP PISSDDDAED 120 DFETLRAIQK RFLAYSTNDT WKNSTADHIE KTEPIYKSST PLEDATCDNI CEQFQDYEKA 180 DNISHFPSDN TEMHPVGLVQ WNQSDANELS TMADKSSRFP KSAQLLINAI KKNRSYQKFL 240 RSKLTQIEVK IEENKKLKER VKILRDFQVS CKKITGRALS MKKDPRIQLI SARKSRTSKD 300 LEVNDKKVTA DYGPPENSSA CNYRMALTKF PLTLQRKKWT REEKENLEKG IRQQFQERAL 360 QFSVDWLSSS DGSSGDGSNL DNIIATVKDL EITPEMIREF LPKVNWDQLA SLYIKGRSAA 420 ECESHWLNHE DPLINRNPWT AEEDKNLLLI VQEKGIGNWF DIAVSLGSNR TPFQCLARYQ 480 RSLNACILKR EWTEEEDDQL RIAVEVFGEC DWQSVASTLK GRTGTQCSNR WKKSLHPTRQ 540 RVGRWTHAED KYLKVAVMLF GPKNWKKIAE VVPGRTQVQC RERWVNSLDP ALNLGIWTKE 600 EDLRLEAAIE EHGYCWSKIA TCMLSRTDNQ CWRRWKLLHP EEVPLLQEAR RIRKATLITN 660 FVDRESERPA LGPNDFNISL PMITPTSEPE NTILPSKENR KERGRRPESE RENDAALRHF 720 SENRRHQSCG KRAQAFSVEV PGMINENEAK TANGHDAARK KQRNPYSENN NFTEPAQVVA 780 FPKKRKRKQP SGSNNYTEAA QHVAIQKKRR RKPPSGHTNC SDQVEDDVVQ VEKRKQQAES 840 NKCIESMQDN SSSHPLSTMC MTTNQEAESF GSSLTKKMKK NPKLSLKQCS KRVHAELGEE 900 QNSVCSENSV FSGGIDGAEV MQNSVVVVDI LGVDDASGER STAKPGSRTK THMNLSTSQS 960 SRITGAEGFE NFSSNKNTKK RRNSSLRQYC RRRKSNVPSG DEDDIMLASL LQDKLKKRIP 1020 SFTDGDKKTP ACFLRNKLKK KRHQIVENAP LSTLKGEDQS RKINQMRSGL QHCDLVISEN 1080 SAFHSRLRQT IMHSDRDIGV VDVVDVVDDT VAPHEVVREA SRMNEGGKLQ ADDITLACLR 1140 RRLKKRRLSI AQNGKTKELP LE

Sequence ? help Back to Top

Protein Sequence Length: 1162 aa Download sequence

MSLSDQYDSG EEVVDDDELS SSEDGDGFDE DMEALKKACL RTGTDLNDLQ ITVADKDLPS  60
TAGAVASASA ASADSGSEDD LELFRSIRSR FALSEDVCEP LSMKPLCTLP PISSDDDAED  120
DFETLRAIQK RFLAYSTNDT WKNSTADHIE KTEPIYKSST PLEDATCDNI CEQFQDYEKA  180
DNISHFPSDN TEMHPVGLVQ WNQSDANELS TMADKSSRFP KSAQLLINAI KKNRSYQKFL  240
RSKLTQIEVK IEENKKLKER VKILRDFQVS CKKITGRALS MKKDPRIQLI SARKSRTSKD  300
LEVNDKKVTA DYGPPENSSA CNYRMALTKF PLTLQRKKWT REEKENLEKG IRQQFQERAL  360
QFSVDWLSSS DGSSGDGSNL DNIIATVKDL EITPEMIREF LPKVNWDQLA SLYIKGRSAA  420
ECESHWLNHE DPLINRNPWT AEEDKNLLLI VQEKGIGNWF DIAVSLGSNR TPFQCLARYQ  480
RSLNACILKR EWTEEEDDQL RIAVEVFGEC DWQSVASTLK GRTGTQCSNR WKKSLHPTRQ  540
RVGRWTHAED KYLKVAVMLF GPKNWKKIAE VVPGRTQVQC RERWVNSLDP ALNLGIWTKE  600
EDLRLEAAIE EHGYCWSKIA TCMLSRTDNQ CWRRWKLLHP EEVPLLQEAR RIRKATLITN  660
FVDRESERPA LGPNDFNISL PMITPTSEPE NTILPSKENR KERGRRPESE RENDAALRHF  720
SENRRHQSCG KRAQAFSVEV PGMINENEAK TANGHDAARK KQRNPYSENN NFTEPAQVVA  780
FPKKRKRKQP SGSNNYTEAA QHVAIQKKRR RKPPSGHTNC SDQVEDDVVQ VEKRKQQAES  840
NKCIESMQDN SSSHPLSTMC MTTNQEAESF GSSLTKKMKK NPKLSLKQCS KRVHAELGEE  900
QNSVCSENSV FSGGIDGAEV MQNSVVVVDI LGVDDASGER STAKPGSRTK THMNLSTSQS  960
SRITGAEGFE NFSSNKNTKK RRNSSLRQYC RRRKSNVPSG DEDDIMLASL LQDKLKKRIP  1020
SFTDGDKKTP ACFLRNKLKK KRHQIVENAP LSTLKGEDQS RKINQMRSGL QHCDLVISEN  1080
SAFHSRLRQT IMHSDRDIGV VDVVDVVDDT VAPHEVVREA SRMNEGGKLQ ADDITLACLR  1140
RRLKKRRLSI AQNGKTKELP LE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	783	788	KKRKRK
2	783	812	KKRKRKQPSGSNNYTEAAQHVAIQKKRRRK
3	784	813	KKRKRKQPSGSNNYTEAAQHVAIQKKRRRK
4	806	813	QKKRRRKP
5	807	812	KKRRRK
6	807	835	KKRRRKPPSGHTNCSDQVEDDVVQVEKRK
7	808	836	KKRRRKPPSGHTNCSDQVEDDVVQVEKRK
8	809	837	KKRRRKPPSGHTNCSDQVEDDVVQVEKRK
9	979	994	KKRRNSSLRQYCRRRK
10	980	995	KKRRNSSLRQYCRRRK
11	1013	1018	DKLKKR
12	1140	1148	RRRLKKRRL
13	1141	1149	RRRLKKRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18100.1	0.0	MYB family protein