PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022738597.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family C3H
Protein Properties Length: 431aa    MW: 47254.6 Da    PI: 7.8574
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022738597.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH27.84.5e-09110131426
                     ---SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH   4 elCrffartGtCkyGdrCkFaHg 26 
                     + C+++ + G C+yGd+C+F H+
  XP_022738597.1 110 KVCNYWVQ-GNCNYGDKCRFLHS 131
                     68******.*************7 PP

Sequence ? help Back to Top
Protein Sequence    Length: 431 aa     Download sequence    
MDLDGSNRSV FNRLGGPSAA PTDSSKHQKV CYHWRAGKCT RFPCPFLHRE LPHPSGPAAS  60
AANGSGHPKR FADDSGFSGP APRRGPNFNN NHNKSWGRMG ANKVVRKTEK VCNYWVQGNC  120
NYGDKCRFLH SWSLGEGFTM LNHLDGHQKV VTGIALPAGM DKLYTGSKDE TVRAWDTNSG  180
QCMGVINLGG EVGCMISEGP WLFVGIPNVV KAWNTQTNQE LSLSGPVGQV YTMVVGNDLL  240
FAGTQDGTIL AWKFNAITNS FEPAASLKGH TLAVVSLVVG ANRLYSGSMD HSIKLWSLET  300
LQCLQTLTEH TNVVMSLLCW EQFLLSCSLD QTIKVWMATE NGLLEVTYTH NDEHGLLNLR  360
GMHDSESKPV LLCACNDNSV KLYDLPSFSE RGKTFAKQEI RTIEVGPGGL FFTGDGTGFR  420
VWKWAEPIAK P
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51980.10.0C3H family protein