PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022738509.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | FAR1 | ||||||||
Protein Properties | Length: 896aa MW: 103501 Da PI: 6.309 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 83.5 | 3.5e-26 | 76 | 162 | 1 | 88 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 +fYn+YA+++GFsvrk+ ++sk +g++++r+f+Cskeg+r++++++ ++ +++r+etrtgC a++ ++++ +gk++v+++e +HnH+ XP_022738509.1 76 RFYNKYARMLGFSVRKDWVNRSKIHGQVVSRKFTCSKEGYRRKDQRD-VNVKKHRKETRTGCLAHMIITRQPNGKYRVSHFEANHNHD 162 5********************************************99.999************************************6 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 896 aa Download sequence |
MNRDDDDDLG GPHDEDRDNR AQTSDKLDLN LEQDCCSPKV NHVNATHSGL PSTSETNADG 60 VLRVGIEFES DEHAYRFYNK YARMLGFSVR KDWVNRSKIH GQVVSRKFTC SKEGYRRKDQ 120 RDVNVKKHRK ETRTGCLAHM IITRQPNGKY RVSHFEANHN HDNINPNNGR TLQLQKELCF 180 PQASEADQPN NLEAQNPAFD LMSKKFLVRE SVDCLDVDYD NHLSSERVRD MEEGEAGRLL 240 HYFQRQHFEN PSFFYAIQLD MNDKVSNIFW ADDNMVVDYN YFGDVVLFDT RCRTNKDYKP 300 FVQFIGLNHH NQVVIFAAAL LYDDTVESLK WLFHTFLEAM SGKKPKVILT DQDTTVVEAI 360 SSVLPESSHR ICVWQMHQNA LKHLSNILKD AKAFANDFRS CIYDHKDEDD FIHAWEAMLD 420 NYNLKQNEWL RWMYREREKW AVVYGKNTFF IDMKHSHLGE SLSNKLRSYL NSDQDLLQFF 480 KHFERVVDEQ RYKEIEATDV MSHCKPKLMG NVILLKHASE VYTPKAFEVF QLEYEKCLNV 540 VANQCSQNGC LSEYKVNTFG KSQEYTVTFD CSDDTVICSC MKFEYVGFLC SHALRVLDYR 600 NIKVVPSRYM LRRWTKDARI GCAQEDSDFI IQEHPKLVVA RRYRDICHSI LNISARAAES 660 DDAFQFASRQ LNEVIEEVER ILAVKAEKAQ VIASSSSAAN ASGSENEEIF LDGNAIEDQH 720 ESGRAESKME NETFVPHRRK QKIDLGRGSN TKSNQNERSN SPKTITSISS ASPAYVSPQA 780 SGPAPVMQGL FNFEATQVVQ CIYQQPNLVM DQQPNAEMYQ QPNFYTDQHD SPSQTQLLQD 840 IVHAEPLIRS TYHDSVSQST QLRQAMELDI RPPHSSSFLH YDHRYRASDT PFLGPK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 1e-109 | FAR1 family protein |