PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022738509.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family FAR1
Protein Properties Length: 896aa    MW: 103501 Da    PI: 6.309
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022738509.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR183.53.5e-2676162188
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 
                     +fYn+YA+++GFsvrk+  ++sk +g++++r+f+Cskeg+r++++++ ++ +++r+etrtgC a++ ++++ +gk++v+++e +HnH+
  XP_022738509.1  76 RFYNKYARMLGFSVRKDWVNRSKIHGQVVSRKFTCSKEGYRRKDQRD-VNVKKHRKETRTGCLAHMIITRQPNGKYRVSHFEANHNHD 162
                     5********************************************99.999************************************6 PP

Sequence ? help Back to Top
Protein Sequence    Length: 896 aa     Download sequence    
MNRDDDDDLG GPHDEDRDNR AQTSDKLDLN LEQDCCSPKV NHVNATHSGL PSTSETNADG  60
VLRVGIEFES DEHAYRFYNK YARMLGFSVR KDWVNRSKIH GQVVSRKFTC SKEGYRRKDQ  120
RDVNVKKHRK ETRTGCLAHM IITRQPNGKY RVSHFEANHN HDNINPNNGR TLQLQKELCF  180
PQASEADQPN NLEAQNPAFD LMSKKFLVRE SVDCLDVDYD NHLSSERVRD MEEGEAGRLL  240
HYFQRQHFEN PSFFYAIQLD MNDKVSNIFW ADDNMVVDYN YFGDVVLFDT RCRTNKDYKP  300
FVQFIGLNHH NQVVIFAAAL LYDDTVESLK WLFHTFLEAM SGKKPKVILT DQDTTVVEAI  360
SSVLPESSHR ICVWQMHQNA LKHLSNILKD AKAFANDFRS CIYDHKDEDD FIHAWEAMLD  420
NYNLKQNEWL RWMYREREKW AVVYGKNTFF IDMKHSHLGE SLSNKLRSYL NSDQDLLQFF  480
KHFERVVDEQ RYKEIEATDV MSHCKPKLMG NVILLKHASE VYTPKAFEVF QLEYEKCLNV  540
VANQCSQNGC LSEYKVNTFG KSQEYTVTFD CSDDTVICSC MKFEYVGFLC SHALRVLDYR  600
NIKVVPSRYM LRRWTKDARI GCAQEDSDFI IQEHPKLVVA RRYRDICHSI LNISARAAES  660
DDAFQFASRQ LNEVIEEVER ILAVKAEKAQ VIASSSSAAN ASGSENEEIF LDGNAIEDQH  720
ESGRAESKME NETFVPHRRK QKIDLGRGSN TKSNQNERSN SPKTITSISS ASPAYVSPQA  780
SGPAPVMQGL FNFEATQVVQ CIYQQPNLVM DQQPNAEMYQ QPNFYTDQHD SPSQTQLLQD  840
IVHAEPLIRS TYHDSVSQST QLRQAMELDI RPPHSSSFLH YDHRYRASDT PFLGPK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.11e-109FAR1 family protein