PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022738483.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

ARR-B

Protein Properties

Length: 557aa MW: 61893.6 Da PI: 6.4754

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022738483.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	87.7	1.1e-27	319	371	3	56
G2-like 3 rlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 +++WtpeLH++Fv+av+qL G+++A+P++ilelmkv+gLt+++v+SHLQkYR++ XP_022738483.1 319 KVDWTPELHKKFVQAVDQL-GIDQAIPSRILELMKVEGLTRHNVASHLQKYRMH 371 789**************.******************************96 PP
2	Myb_DNA-binding	42.8	1.2e-13	320	369	2	48
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 WT+e+++++v+av qlG + +++I + m +g+t+ ++ s++qky+ XP_022738483.1 320 VDWTPELHKKFVQAVDQLGIDqaIPSRILELMKvEGLTRHNVASHLQKYR 369 57***********************************************7 PP
3	Response_reg	25.5	6.7e-10	20	126	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH..HHHHESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealell..kekdpDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl+ dD+ + + +++ le +y +v ++ + +eal + + +++++ ++ ++ + +G ++k +++++ +lp i+ + +++ +++ G XP_022738483.1 20 VLLLDDDSNSAAEIKSKLEAMDY-IVYTFCNEHEALSAVssRPENFHVAIVEVSTNNNNG--TFKFLETAK-DLPTIMTSNIHCISTMMKCIAFG 110 8999*****************.***********555555********999..477777776.99999999******* PP ESEEEESS--HHHHHH CS Response_reg 94 akdflsKpfdpeelvk 109 a +fl Kp +++l++ XP_022738483.1 111 AVEFLRKPLCEDKLRN 126 *******9999986 PP

Sequence ? help Back to Top
Protein Sequence Length: 557 aa Download sequence
MVCTSNDLSA WKDFPKGLRV LLLDDDSNSA AEIKSKLEAM DYIVYTFCNE HEALSAVSSR 60 PENFHVAIVE VSTNNNNGTF KFLETAKDLP TIMTSNIHCI STMMKCIAFG AVEFLRKPLC 120 EDKLRNIWQH VVHKAFNAGG NDLSESLKPI KESVVSMLHL QLENGKSKNE DSDKTEDVPV 180 IHGNDREPSP GSDKYPAPST PQLEQGARLL DDVDCQDHTN CSTEKESGEH DGESKSVETT 240 SGNTIAEVTA PVGQSHGPTE TMVKEEADLF DGIKGESTMY SHPQNRENSE GSHTGAEKPS 300 TVSGLHSSYL NKVNRKRLKV DWTPELHKKF VQAVDQLGID QAIPSRILEL MKVEGLTRHN 360 VASHLQKYRM HRRHILPKED GRRWPQRDQT QRSCYPHKPI MAFPPYHSNH VVPIGPVYPM 420 WGAPPHPASI QMWGSQGYPP WQPAESWHLK PYPGVHADAW GCPVMPPPQG YCCTFTQNAS 480 GFHYSSTMDN RSGMPQNSVE HQPAEEVIDK VVKEAINKPW LPLPLGLKPP ATDSVLAELS 540 RQGISTIPTH ISGSNSC

Sequence ? help Back to Top

Protein Sequence Length: 557 aa Download sequence

MVCTSNDLSA WKDFPKGLRV LLLDDDSNSA AEIKSKLEAM DYIVYTFCNE HEALSAVSSR  60
PENFHVAIVE VSTNNNNGTF KFLETAKDLP TIMTSNIHCI STMMKCIAFG AVEFLRKPLC  120
EDKLRNIWQH VVHKAFNAGG NDLSESLKPI KESVVSMLHL QLENGKSKNE DSDKTEDVPV  180
IHGNDREPSP GSDKYPAPST PQLEQGARLL DDVDCQDHTN CSTEKESGEH DGESKSVETT  240
SGNTIAEVTA PVGQSHGPTE TMVKEEADLF DGIKGESTMY SHPQNRENSE GSHTGAEKPS  300
TVSGLHSSYL NKVNRKRLKV DWTPELHKKF VQAVDQLGID QAIPSRILEL MKVEGLTRHN  360
VASHLQKYRM HRRHILPKED GRRWPQRDQT QRSCYPHKPI MAFPPYHSNH VVPIGPVYPM  420
WGAPPHPASI QMWGSQGYPP WQPAESWHLK PYPGVHADAW GCPVMPPPQG YCCTFTQNAS  480
GFHYSSTMDN RSGMPQNSVE HQPAEEVIDK VVKEAINKPW LPLPLGLKPP ATDSVLAELS  540
RQGISTIPTH ISGSNSC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18020.3	1e-152	ARR-B family protein