PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022738415.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

GRF

Protein Properties

Length: 473aa MW: 52093.9 Da PI: 7.2895

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022738415.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	76.8	2.3e-24	185	228	1	44
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+ep+rCrRtDGKkWRCsr+v +++k+CErH h++r rsrk++e XP_022738415.1 185 DPEPWRCRRTDGKKWRCSRDVAPDQKYCERHSHKSRPRSRKPVE 228 79***************************************987 PP
2	QLQ	60.2	5.9e-21	130	164	2	36
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiq 36 +FTaaQ+q+L++Q ++yKy++a++PvPpeLl +++ XP_022738415.1 130 PFTAAQWQELERQTMIYKYMMASVPVPPELLIPLT 164 9******************************9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 473 aa Download sequence
MGTRNNAFVG TEKGFGRSSD QCCDVGLDLR MQQVQVSCPN KRFMPMPHHQ LSSSSSCCGE 60 GFDGGACGGG PIVCNTSNQV PCTGEIYDVV GAASASVFAA AAVIKSLHHH PSFPHNSTGE 120 MAAPVNARVP FTAAQWQELE RQTMIYKYMM ASVPVPPELL IPLTRNTSNA IKGSLELGFS 180 GSSSDPEPWR CRRTDGKKWR CSRDVAPDQK YCERHSHKSR PRSRKPVELP NHSINNNDHK 240 SQTLNMASDS SKQHHQNPHF INHNDAHFFT SSFDQPRCWE WFMKGETTVP FASNSNREWR 300 QYKTQEAKYG GNVSEHQQHY KDHRLNLQAQ HLNEQFSPSL TSLGGSLNLN QTHSQETRSF 360 IDAWSTAERE VAEMDGGIGS KRPVSSNEKL PLSSLTLSMS GGNGNNQEDD ENSEMGDFGI 420 MGLAMENVRA LRPQMADPIS WMGSPPGGPL AEALCLGIAT RQSTSTSSYS KST

Sequence ? help Back to Top

Protein Sequence Length: 473 aa Download sequence

MGTRNNAFVG TEKGFGRSSD QCCDVGLDLR MQQVQVSCPN KRFMPMPHHQ LSSSSSCCGE  60
GFDGGACGGG PIVCNTSNQV PCTGEIYDVV GAASASVFAA AAVIKSLHHH PSFPHNSTGE  120
MAAPVNARVP FTAAQWQELE RQTMIYKYMM ASVPVPPELL IPLTRNTSNA IKGSLELGFS  180
GSSSDPEPWR CRRTDGKKWR CSRDVAPDQK YCERHSHKSR PRSRKPVELP NHSINNNDHK  240
SQTLNMASDS SKQHHQNPHF INHNDAHFFT SSFDQPRCWE WFMKGETTVP FASNSNREWR  300
QYKTQEAKYG GNVSEHQQHY KDHRLNLQAQ HLNEQFSPSL TSLGGSLNLN QTHSQETRSF  360
IDAWSTAERE VAEMDGGIGS KRPVSSNEKL PLSSLTLSMS GGNGNNQEDD ENSEMGDFGI  420
MGLAMENVRA LRPQMADPIS WMGSPPGGPL AEALCLGIAT RQSTSTSSYS KST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24150.1	5e-35	GRF family protein