PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022738406.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

TCP

Protein Properties

Length: 373aa MW: 41285 Da PI: 6.9147

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022738406.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	95.7	8.7e-30	50	185	3	129
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg........ 88 g+kdrhsk++T +g+RdRR+Rls+++a++++dLqd+LG+ ++sk ++WLl k i++l+ ++ ++ + + +s +sn+s++ XP_022738406.1 50 GGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDRLGLSQPSKVVDWLLDITKDDIDKLPPLQMPQGFGQfHQPMLVSHESNPSQSslapffda 144 79*************************************************************66666333433333333333333344588875 PP TCP 89 kaaksaakskksqksaasalnlakesrakarararertrek 129 +++ + + +s + + n+a+ rak+++ +re+t+ XP_022738406.1 145 NSMFMKDGEDQSIAAKRYWDNMAAALRAKSKEVERESTNAA 185 44555546666666677778888899999999999987754 PP

Sequence ? help Back to Top
Protein Sequence Length: 373 aa Download sequence
MISSSREKDL QTKQEGETND GKVSKGPSSS RQWSAGFRNP RIVRVSRSFG GKDRHSKVCT 60 IRGLRDRRIR LSVPTAIQLY DLQDRLGLSQ PSKVVDWLLD ITKDDIDKLP PLQMPQGFGQ 120 FHQPMLVSHE SNPSQSSLAP FFDANSMFMK DGEDQSIAAK RYWDNMAAAL RAKSKEVERE 180 STNAAAEKGK WIRLNEPENQ DGNIGVYTGG QALSQKLFPL TNHSSSPGLL NNAMPFNSYC 240 HWEPSSLSLS QFGNHGFLPQ TENFLNGNTS VQLPSSLSLP LAHAPQFFFC PPSTMPSLFP 300 TYPPYGTAPG PGDSNDSRQM NHFQLLSSNS QHVLPNSVTM SSPMKHFSLN VNAGLTLTQN 360 DDESHADEDN TDS

Sequence ? help Back to Top

Protein Sequence Length: 373 aa Download sequence

MISSSREKDL QTKQEGETND GKVSKGPSSS RQWSAGFRNP RIVRVSRSFG GKDRHSKVCT  60
IRGLRDRRIR LSVPTAIQLY DLQDRLGLSQ PSKVVDWLLD ITKDDIDKLP PLQMPQGFGQ  120
FHQPMLVSHE SNPSQSSLAP FFDANSMFMK DGEDQSIAAK RYWDNMAAAL RAKSKEVERE  180
STNAAAEKGK WIRLNEPENQ DGNIGVYTGG QALSQKLFPL TNHSSSPGLL NNAMPFNSYC  240
HWEPSSLSLS QFGNHGFLPQ TENFLNGNTS VQLPSSLSLP LAHAPQFFFC PPSTMPSLFP  300
TYPPYGTAPG PGDSNDSRQM NHFQLLSSNS QHVLPNSVTM SSPMKHFSLN VNAGLTLTQN  360
DDESHADEDN TDS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60970.1	2e-50	TCP family protein