PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022738326.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | ERF | ||||||||
Protein Properties | Length: 218aa MW: 24656.4 Da PI: 9.5261 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 55.5 | 1.4e-17 | 43 | 92 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GVr ++ +g+Wv+eIr+p++ + r++lg+f tae+Aa+a++ a +++g XP_022738326.1 43 TYRGVRMRS-WGKWVSEIREPRK---KSRIWLGTFPTAEMAARAHDVASIAIKG 92 69****998.**********843...6*******************99877765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 218 aa Download sequence |
MDLNYIKQSL RKKRSNRTKG LLMEGNGSDQ QSYKKGKAYR HPTYRGVRMR SWGKWVSEIR 60 EPRKKSRIWL GTFPTAEMAA RAHDVASIAI KGSSAYLNFP ESAHELPRPA TSSRRDIQEA 120 ANKAAYAMID QQESFEVKGE PSQDAMPVPH SPSSNTTSSQ TQGSPSSQSV NTDQSMWFDL 180 PDLSVEANAS HRFGYSSCWQ QAGIDTEFQF EETMHWDK |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 11 | 37 | RKKRSNRTKGLLMEGNGSDQQSYKKGK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G44940.1 | 5e-51 | ERF family protein |