PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022738299.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | C2H2 | ||||||||
Protein Properties | Length: 270aa MW: 31307 Da PI: 8.5462 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 12.4 | 0.00047 | 104 | 127 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23 ++C++C+ksF+ L +H + H XP_022738299.1 104 WRCGYCKKSFRAETFLDQHFDNrH 127 58**********999999976655 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 270 aa Download sequence |
MERRAKAITS ILFLEFLLLH NAVSQQTFEE SAAASTLKQE PHHTHEVHCS RERSRAAWQI 60 IEDYLMPFVE EEGYQISTKC RLHPDNDLFR DQEQHKIHLD VNEWRCGYCK KSFRAETFLD 120 QHFDNRHYNL LNVNQTKCLA DLCGALHCDF VMGSKLLKTK CNPAAAMRNR HLCESLADSC 180 FPASQGPSAS RLHELFLHQF CDDHTCSGKR KPFPKGGKKQ INLLYMATSI LILMLLPLFY 240 LLYYLYQRDM KTGTQVLRRV SQVGRKAKPS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G63280.1 | 1e-107 | C2H2 family protein |