PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022738273.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | M-type_MADS | ||||||||
Protein Properties | Length: 334aa MW: 38157.4 Da PI: 6.5888 | ||||||||
Description | M-type_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 72.4 | 3.9e-23 | 9 | 53 | 1 | 45 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgk 45 kr e +snrqvt+skRr+gilKKA+ELS+LCd+ + +++fs+tgk XP_022738273.1 9 KRLEGYSNRQVTYSKRRTGILKKAKELSILCDIHIILLMFSPTGK 53 67899**************************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 334 aa Download sequence |
MGRVKLKIKR LEGYSNRQVT YSKRRTGILK KAKELSILCD IHIILLMFSP TGKPTLFLGE 60 RSNIEEVIEK FAQLTPQERA KRKLESLEAL KKTFQKLDHD VNIQNFLGAT QSVEEMTNEV 120 SMLEAHLTEV HKRLSYWSNP DKIDNIEHLT QMEDSLRESI ERIRIHKGNF GKHHLMSLEC 180 ANQFQNGIPM PIMIGGVQEA QPITWLPNNE NQQMLLHNEP KFLPHRDTEC SVNGSLACSS 240 GYFGSGKQTE IGNSGQVDNV VQENNALNEL GSNAWMNLQL GEQYLYPPYV ASNLLDNEKL 300 RPEMEVNLQE NPAIYQVISN FEIPRPMYNS GHQA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G18750.1 | 1e-109 | M-type_MADS family protein |