PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022738269.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | M-type_MADS | ||||||||
Protein Properties | Length: 336aa MW: 38343.6 Da PI: 6.5888 | ||||||||
Description | M-type_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 72.3 | 4e-23 | 9 | 53 | 1 | 45 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgk 45 kr e +snrqvt+skRr+gilKKA+ELS+LCd+ + +++fs+tgk XP_022738269.1 9 KRLEGYSNRQVTYSKRRTGILKKAKELSILCDIHIILLMFSPTGK 53 67899**************************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 336 aa Download sequence |
MGRVKLKIKR LEGYSNRQVT YSKRRTGILK KAKELSILCD IHIILLMFSP TGKPTLFLGE 60 RSNIEEVIEK FAQLTPQERA KRKLESLEAL KKTFQKLDHD VNIQNFLGAT SQSVEEMTNE 120 VSMLEAHLTE VHKRLSYWSN PDKIDNIEHL TQMEDSLRES IERIRIHKGN FGKHHLMSLE 180 CANQVFQNGI PMPIMIGGVQ EAQPITWLPN NENQQMLLHN EPKFLPHRDT ECSVNGSLAC 240 SSGYFGSGKQ TEIGNSGQVD NVVQENNALN ELGSNAWMNL QLGEQYLYPP YVASNLLDNE 300 KLRPEMEVNL QENPAIYQVI SNFEIPRPMY NSGHQA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G18750.1 | 1e-111 | M-type_MADS family protein |