PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022738182.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 304aa MW: 34270.2 Da PI: 7.5691

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022738182.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	44.2	3.5e-14	100	151	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ ++ Lr+l+P++ + ++ + a+i+ A+e++k+L+ XP_022738182.1 100 QRMTHIAVERNRRKQMNEHLAVLRSLMPES---YVQRGDQASIVGGAIEFVKELE 151 79**************************...9****************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 304 aa Download sequence
MALETLSSNE LLNFIICDTI SATPYSIHDS FVTNFSLESS FSSQEQASSA LNCFSMVTTP 60 QCRSTGAEAV ERRPNLAVQG RKKRRRKPRI WKNKEEAETQ RMTHIAVERN RRKQMNEHLA 120 VLRSLMPESY VQRGDQASIV GGAIEFVKEL EHLLQTLEAE KLRVLQQVRP AAANEEIATN 180 SKLPSPPFAQ FFMYPQYTWS QIPIKCTSKT KASIADIEVT LIETHANLRI LSRKGPRQLS 240 MLVDGFQSLY LSILHLNVTT MDPLVLYSIS AKVEEGCQLS SVDDIAGAVH HMLRIIEEDT 300 TALY

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	81	87	RKKRRRK
2	81	88	RKKRRRKP
3	82	87	KKRRRK
4	101	112	RMTHIAVERNRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72210.1	6e-74	bHLH family protein