PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022738089.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | C2H2 | ||||||||
Protein Properties | Length: 379aa MW: 43053.1 Da PI: 9.6476 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 13.9 | 0.00017 | 132 | 154 | 2 | 23 |
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 C+ Cg++F +++ L++H + H XP_022738089.1 132 FCKVCGRRFYTNEKLVNHFKQiH 154 6*****************98766 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 379 aa Download sequence |
MLHKFPTIIN SMQSTRIKTL SISLSRYCHF KTKMGFESLN RTSTLASKTA QNNVAIFWDL 60 DNKPPNSFPP FEAAVKLKTA ASSFGVVRSM VAYANHHAFS YVPIVVREQR RERKLLNQLE 120 NKGVIKSVEP HFCKVCGRRF YTNEKLVNHF KQIHEREHQK RLNQIESARG SRRVKLVGKY 180 SMKMEKYKNA ARDVLTPKVG YGLAAELKRA GFWVGTVSNR PQAADVALRD HMVNVMDKRK 240 AECLVLVSDD SDFVEVLKEA KLRCLKTVVV GDLNDGALKR VADTGFSWME ILKGKAKKEA 300 VSVVGKWKDR DILKRLEWTY NPEVDGKLNG SEDVFDDQSE DQDFNSTDDG SNADCICTKD 360 SGPWWELDSD SDFNSSQSQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G12240.1 | 1e-153 | C2H2 family protein |