PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022738089.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family C2H2
Protein Properties Length: 379aa    MW: 43053.1 Da    PI: 9.6476
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022738089.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.90.00017132154223
                     EETTTTEEESSHHHHHHHHHH.T CS
         zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                      C+ Cg++F +++ L++H +  H
  XP_022738089.1 132 FCKVCGRRFYTNEKLVNHFKQiH 154
                     6*****************98766 PP

Sequence ? help Back to Top
Protein Sequence    Length: 379 aa     Download sequence    
MLHKFPTIIN SMQSTRIKTL SISLSRYCHF KTKMGFESLN RTSTLASKTA QNNVAIFWDL  60
DNKPPNSFPP FEAAVKLKTA ASSFGVVRSM VAYANHHAFS YVPIVVREQR RERKLLNQLE  120
NKGVIKSVEP HFCKVCGRRF YTNEKLVNHF KQIHEREHQK RLNQIESARG SRRVKLVGKY  180
SMKMEKYKNA ARDVLTPKVG YGLAAELKRA GFWVGTVSNR PQAADVALRD HMVNVMDKRK  240
AECLVLVSDD SDFVEVLKEA KLRCLKTVVV GDLNDGALKR VADTGFSWME ILKGKAKKEA  300
VSVVGKWKDR DILKRLEWTY NPEVDGKLNG SEDVFDDQSE DQDFNSTDDG SNADCICTKD  360
SGPWWELDSD SDFNSSQSQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G12240.11e-153C2H2 family protein