PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022738009.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family HD-ZIP
Protein Properties Length: 300aa    MW: 33633 Da    PI: 7.7003
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022738009.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox59.55.3e-19138192256
                     T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     rk+ +++keq  +Lee F+++++++ +++  LAk+lgL  rqV vWFqNrRa+ k
  XP_022738009.1 138 RKKLRLSKEQSAILEESFKEHNTLNPKQKLALAKQLGLRPRQVEVWFQNRRARTK 192
                     788899***********************************************98 PP
2HD-ZIP_I/II129.91e-41138227191
     HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 
                     +kk+rlskeq+++LEesF+e+++L+p++K +la++Lgl+prqv+vWFqnrRARtk+kq+E+d+e+Lkr++++l+een+rL+kev+eLr +l
  XP_022738009.1 138 RKKLRLSKEQSAILEESFKEHNTLNPKQKLALAKQLGLRPRQVEVWFQNRRARTKLKQTEVDCEFLKRCCENLTEENRRLQKEVQELR-AL 227
                     69*************************************************************************************9.55 PP
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    
MMVEKEDLGL SLGLSYPQNH HALQLNLRPS LVPTSANSCS SPFGLALQKP SWNDVSAASD  60
PNSESFRAET RSFLRGIDVN RLPSTVDCEE EAGVSSPNST ISSVSGKRSE REGNGDEFEI  120
ERACSRGISD EEDGDTSRKK LRLSKEQSAI LEESFKEHNT LNPKQKLALA KQLGLRPRQV  180
EVWFQNRRAR TKLKQTEVDC EFLKRCCENL TEENRRLQKE VQELRALKLS PQFYMQMTPP  240
TTLTMCPSCE RVAVPPNAPS TVDPRCLQLA QTHHRPIPIN PWAAATPMPH GPFDALRPRS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1137143SRKKLRL
2187195RRARTKLKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16780.11e-117HD-ZIP family protein