PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022737965.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

TCP

Protein Properties

Length: 387aa MW: 44564.8 Da PI: 7.9958

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022737965.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	121.8	7.7e-38	123	269	3	133
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssa.seceaesssssasnsssg........ 88 k+drhski T+ g+RdRR+Rls+++a+ fF Lqd LG+dk+s t+eWLl qakp+ik+l++++ s+ ++c+ ++++s +s+s+ g XP_022737965.1 123 SKRDRHSKINTANGPRDRRMRLSLDVARDFFGLQDILGYDKASRTVEWLLIQAKPEIKKLARSQLSQMnNSCNVAAEKSPSSTSE-Gevvsgidk 216 69***********************************************************4444314452222222222222.235566666 PP TCP 89 ........kaaksaakskksqksaasalnlakesrakarararertrekmrik 133 k ++s++++k +q ++ ++ la++ r+karara+ rt+ k + + XP_022737965.1 217 asiegrfsKGKPSTKEKKVRQPRKITFGPLARDLREKARARAKARTKAKIMWT 269 77779996333333333333333334588888*************998765 PP

Sequence ? help Back to Top
Protein Sequence Length: 387 aa Download sequence
MFPSNNNGNN DPITYIDHSI LHRHFSTDIT PYSKHDDLPL SIFHFPSPYY NQCELELEDH 60 DFFLHQYHDL LLHHQTLMTD NSVSETIINM PDSSKNEEST IDCTKKSHNA AEQQIPRKRS 120 SSSKRDRHSK INTANGPRDR RMRLSLDVAR DFFGLQDILG YDKASRTVEW LLIQAKPEIK 180 KLARSQLSQM NNSCNVAAEK SPSSTSEGEV VSGIDKASIE GRFSKGKPST KEKKVRQPRK 240 ITFGPLARDL REKARARAKA RTKAKIMWTQ RFDESKLCYD TRNINDLNKF SSWSSFETGE 300 ESGIQDHNRN NPSLEAVLAE FKELSSRDGE HIRIHWDMVD ESLAIMNKWS PNSMFNCLQN 360 AGINQEHQLT DFMSFGKPWE AYNNKNL

Sequence ? help Back to Top

Protein Sequence Length: 387 aa Download sequence

MFPSNNNGNN DPITYIDHSI LHRHFSTDIT PYSKHDDLPL SIFHFPSPYY NQCELELEDH  60
DFFLHQYHDL LLHHQTLMTD NSVSETIINM PDSSKNEEST IDCTKKSHNA AEQQIPRKRS  120
SSSKRDRHSK INTANGPRDR RMRLSLDVAR DFFGLQDILG YDKASRTVEW LLIQAKPEIK  180
KLARSQLSQM NNSCNVAAEK SPSSTSEGEV VSGIDKASIE GRFSKGKPST KEKKVRQPRK  240
ITFGPLARDL REKARARAKA RTKAKIMWTQ RFDESKLCYD TRNINDLNKF SSWSSFETGE  300
ESGIQDHNRN NPSLEAVLAE FKELSSRDGE HIRIHWDMVD ESLAIMNKWS PNSMFNCLQN  360
AGINQEHQLT DFMSFGKPWE AYNNKNL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18550.2	1e-21	TCP family protein