PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022737933.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

TCP

Protein Properties

Length: 412aa MW: 44329.8 Da PI: 7.6738

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022737933.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	132	5.4e-41	88	192	2	104
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssgkaaksaa 95 ++k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLlqqa+pa++++tgt++++a+++ + s +ss+s+ s +++ +s+ XP_022737933.1 88 PPKRTSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTsLNISLRSSGSSMSVPSQLRSSG 182 789******************************************************************99988888888888666664444444 PP TCP 96 .kskksqksa 104 +s++s ++ XP_022737933.1 183 fNSNFSMQQR 192 4444444443 PP

Sequence ? help Back to Top
Protein Sequence Length: 412 aa Download sequence
MEGGGSDDHQ LHHHHHLHHH HHHQQQHHRP NFPFQLLEKK EEDNQPCSSS SSLPFPSLVP 60 PSSSADQPNT TRSIASLQIS PEPSKKPPPK RTSTKDRHTK VDGRGRRIRM PALCAARVFQ 120 LTRELGHKSD GETIEWLLQQ AEPAVIAATG TGTIPANFTS LNISLRSSGS SMSVPSQLRS 180 SGFNSNFSMQ QRRSLFPGIG LETTPTFLNF QSSSNLTSMF QAKQELRDNS TSLDISETEE 240 GTLGRKRRPE QDLSSQHQMA NYLLQSSTGA IPAASHGQIP ANFWMVTNSN NQVISGDPVW 300 TFPSVNNSAL YRGTMSSGLH FMNFPTPMAL LPGQQLGSST ATTGAGGGSG GSNCISEGQL 360 NMLAGLNPYR QVSGTGVSES QVSGSHSHHG GEGGVGVGSG SDDRLDTTSH HS

Sequence ? help Back to Top

Protein Sequence Length: 412 aa Download sequence

MEGGGSDDHQ LHHHHHLHHH HHHQQQHHRP NFPFQLLEKK EEDNQPCSSS SSLPFPSLVP  60
PSSSADQPNT TRSIASLQIS PEPSKKPPPK RTSTKDRHTK VDGRGRRIRM PALCAARVFQ  120
LTRELGHKSD GETIEWLLQQ AEPAVIAATG TGTIPANFTS LNISLRSSGS SMSVPSQLRS  180
SGFNSNFSMQ QRRSLFPGIG LETTPTFLNF QSSSNLTSMF QAKQELRDNS TSLDISETEE  240
GTLGRKRRPE QDLSSQHQMA NYLLQSSTGA IPAASHGQIP ANFWMVTNSN NQVISGDPVW  300
TFPSVNNSAL YRGTMSSGLH FMNFPTPMAL LPGQQLGSST ATTGAGGGSG GSNCISEGQL  360
NMLAGLNPYR QVSGTGVSES QVSGSHSHHG GEGGVGVGSG SDDRLDTTSH HS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47620.1	2e-53	TCP family protein