PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022737914.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

Trihelix

Protein Properties

Length: 353aa MW: 38405.7 Da PI: 5.5523

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022737914.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	90.9	1.3e-28	46	140	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgk.........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 rWt+qe+l+Li+++r e+r+rrg+ + +p+W++vs++++++g++r+p+qC+++w+nl++++kkike+e++ ++e++s +++ ++l+ XP_022737914.1 46 RWTRQEILVLIQGKRVAENRVRRGRaaglafgsgQVEPKWASVSSYCKRHGVNRGPVQCRKRWSNLAGDFKKIKEWENNIREETESFWVMRNDLR 140 8********************97778888888*******************************************99999999999986 PP

Sequence ? help Back to Top
Protein Sequence Length: 353 aa Download sequence
MASEQLSSAA TPEPVEGLTD AVNGVESRPA SGDGGDDVSK APRLPRWTRQ EILVLIQGKR 60 VAENRVRRGR AAGLAFGSGQ VEPKWASVSS YCKRHGVNRG PVQCRKRWSN LAGDFKKIKE 120 WENNIREETE SFWVMRNDLR RERKLPGFFD KEVYDILDGG ATGVPSSTTA PALALALTPT 180 PVAQDVTEDV EAVFDSGRSA AAEDGLFSDF EQDDGAGSPG KAEPAVAGDA GKAYPAPIPI 240 SEKQYHPQPA IPGNQSQGTT KEKHPTSNPE IGSASQEARK RKRMATDGDE EISNLQYHLI 300 DVLERNGKML VAQLEAQNTN FQQDRELRKD HADNLVAVLN KLADALGRIA DKL

Sequence ? help Back to Top

Protein Sequence Length: 353 aa Download sequence

MASEQLSSAA TPEPVEGLTD AVNGVESRPA SGDGGDDVSK APRLPRWTRQ EILVLIQGKR  60
VAENRVRRGR AAGLAFGSGQ VEPKWASVSS YCKRHGVNRG PVQCRKRWSN LAGDFKKIKE  120
WENNIREETE SFWVMRNDLR RERKLPGFFD KEVYDILDGG ATGVPSSTTA PALALALTPT  180
PVAQDVTEDV EAVFDSGRSA AAEDGLFSDF EQDDGAGSPG KAEPAVAGDA GKAYPAPIPI  240
SEKQYHPQPA IPGNQSQGTT KEKHPTSNPE IGSASQEARK RKRMATDGDE EISNLQYHLI  300
DVLERNGKML VAQLEAQNTN FQQDRELRKD HADNLVAVLN KLADALGRIA DKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33550.1	1e-117	Trihelix family protein