PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022737841.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | C2H2 | ||||||||
Protein Properties | Length: 558aa MW: 61268.6 Da PI: 8.4856 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 11.8 | 0.00074 | 99 | 118 | 2 | 21 |
EETTTTEEESSHHHHHHHHH CS zf-C2H2 2 kCpdCgksFsrksnLkrHir 21 +C+ Cgk F ++ L H++ XP_022737841.1 99 VCKECGKGFQSWKALFGHMK 118 6******************7 PP | |||||||
2 | zf-C2H2 | 11.6 | 0.00086 | 474 | 496 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++Cp+C k+F++ L H r+H XP_022737841.1 474 HECPICLKVFPSGQALGGHKRSH 496 79******************999 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 558 aa Download sequence |
MEEDQEFKHV CKFCSKSFPC GRSLGGHMRS HMTNNNNSAE TDKKPGKKKL ISVNNVGNDA 60 NTETGLEAGI NGGYILRENP KKTWRLADSS EDTSVHDKVC KECGKGFQSW KALFGHMKCH 120 SEKERASNNS LVEQDSWTSA NQKLIMDSQS DNETAAPSKG RRSKRRTRYM GTANSSTFSL 180 TNHASSSMSE IEQEQEEVAL SLMMLSRDVN HWAGLNSVAE SSDNNSVFLE AKIDIKASIC 240 NGKVVQKLKK QKEKKLESAT VDSKTFQTGA GQSEFCAFGL SKTGVIRVNK SKNEVSVDES 300 VKFERNSKSQ LDGQFGAENS EVQLGKNFVI QTGVNRSQLG SNKLNSSKRK LQDFSCDPEL 360 KSGSVNKLTT AVLDSEFCQD PHKRSKFECT TCNKIFHSYQ ALGGHRASHK KIKGCFASRI 420 DSSENSIETE NSPDPAADGK LVKSIGNETP VARLAADSDD KAEVSYGAKK IKGHECPICL 480 KVFPSGQALG GHKRSHLVAE AKENQTIVIQ KPIPEIRDFL DLNLPAPVEE ETSGHVGFKP 540 WWAGSSHKHE ALVGLISN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G26610.1 | 9e-40 | C2H2 family protein |