PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022737841.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family C2H2
Protein Properties Length: 558aa    MW: 61268.6 Da    PI: 8.4856
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022737841.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.80.0007499118221
                     EETTTTEEESSHHHHHHHHH CS
         zf-C2H2   2 kCpdCgksFsrksnLkrHir 21 
                     +C+ Cgk F ++  L  H++
  XP_022737841.1  99 VCKECGKGFQSWKALFGHMK 118
                     6******************7 PP

2zf-C2H211.60.00086474496123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ++Cp+C k+F++   L  H r+H
  XP_022737841.1 474 HECPICLKVFPSGQALGGHKRSH 496
                     79******************999 PP

Sequence ? help Back to Top
Protein Sequence    Length: 558 aa     Download sequence    
MEEDQEFKHV CKFCSKSFPC GRSLGGHMRS HMTNNNNSAE TDKKPGKKKL ISVNNVGNDA  60
NTETGLEAGI NGGYILRENP KKTWRLADSS EDTSVHDKVC KECGKGFQSW KALFGHMKCH  120
SEKERASNNS LVEQDSWTSA NQKLIMDSQS DNETAAPSKG RRSKRRTRYM GTANSSTFSL  180
TNHASSSMSE IEQEQEEVAL SLMMLSRDVN HWAGLNSVAE SSDNNSVFLE AKIDIKASIC  240
NGKVVQKLKK QKEKKLESAT VDSKTFQTGA GQSEFCAFGL SKTGVIRVNK SKNEVSVDES  300
VKFERNSKSQ LDGQFGAENS EVQLGKNFVI QTGVNRSQLG SNKLNSSKRK LQDFSCDPEL  360
KSGSVNKLTT AVLDSEFCQD PHKRSKFECT TCNKIFHSYQ ALGGHRASHK KIKGCFASRI  420
DSSENSIETE NSPDPAADGK LVKSIGNETP VARLAADSDD KAEVSYGAKK IKGHECPICL  480
KVFPSGQALG GHKRSHLVAE AKENQTIVIQ KPIPEIRDFL DLNLPAPVEE ETSGHVGFKP  540
WWAGSSHKHE ALVGLISN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26610.19e-40C2H2 family protein