PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022737681.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

CO-like

Protein Properties

Length: 468aa MW: 51606.1 Da PI: 7.3214

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022737681.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	18.6	4e-06	13	51	5	37
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......H 37 C ++e+ + l+C+ ++ lC C ++ H+ H XP_022737681.1 13 PCGFCNEQIAVLYCRADSAKLCLFCDQHVHSAnllsrkH 51 6***************************99545555555 PP
2	zf-B_box	23.4	1.2e-07	54	98	3	41
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvp 41 ++C++++ ++++ C +++ lC++C H g H+++p XP_022737681.1 54 SQICDNCGTEPVSVRCATDSLVLCQECDWDAHGGcsvsatHDRTP 98 579*************************99996688999998877 PP
3	CCT	64.5	3e-22	420	463	1	44
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 R +a++RYkeK+ktR+++K+irYesRKa+A++R+RvKGrFvk+a XP_022737681.1 420 RGNAMQRYKEKKKTRRYDKHIRYESRKARADTRKRVKGRFVKAA 463 7789**************************************87 PP

Sequence ? help Back to Top
Protein Sequence Length: 468 aa Download sequence
MVSPKPEGKG TVPCGFCNEQ IAVLYCRADS AKLCLFCDQH VHSANLLSRK HLRSQICDNC 60 GTEPVSVRCA TDSLVLCQEC DWDAHGGCSV SATHDRTPVE GFSGCPSALE LASAWGYDLE 120 EKKLSDQSWN RDYQDLMMPA VESWAYKTSV QEMMVPYDSF SYGEMLKKQN LGSGKCKQVI 180 YKQLVDLMKR DFMGGVVADG GGGVGENLVS NVESNGSFLA RQDVIQPQLQ QETQTPFTSL 240 LMMQTQESER VVDGVNVLWN GNLNVQTPQN FLQIWDFKLG RLRGEEECNK SQSEEVGYGG 300 SDAGFKIKNF SELMKDTSLT NVKLLGDICH IDYPPTSQDD MASVNNNNPS NPGANQGPAT 360 SESNNIPIAR PSSGAAFGKT KCSSSSNDVH FMQQPFLVKG AQARPAAPNK ADLELLAQNR 420 GNAMQRYKEK KKTRRYDKHI RYESRKARAD TRKRVKGRFV KAADASAG

Sequence ? help Back to Top

Protein Sequence Length: 468 aa Download sequence

MVSPKPEGKG TVPCGFCNEQ IAVLYCRADS AKLCLFCDQH VHSANLLSRK HLRSQICDNC  60
GTEPVSVRCA TDSLVLCQEC DWDAHGGCSV SATHDRTPVE GFSGCPSALE LASAWGYDLE  120
EKKLSDQSWN RDYQDLMMPA VESWAYKTSV QEMMVPYDSF SYGEMLKKQN LGSGKCKQVI  180
YKQLVDLMKR DFMGGVVADG GGGVGENLVS NVESNGSFLA RQDVIQPQLQ QETQTPFTSL  240
LMMQTQESER VVDGVNVLWN GNLNVQTPQN FLQIWDFKLG RLRGEEECNK SQSEEVGYGG  300
SDAGFKIKNF SELMKDTSLT NVKLLGDICH IDYPPTSQDD MASVNNNNPS NPGANQGPAT  360
SESNNIPIAR PSSGAAFGKT KCSSSSNDVH FMQQPFLVKG AQARPAAPNK ADLELLAQNR  420
GNAMQRYKEK KKTRRYDKHI RYESRKARAD TRKRVKGRFV KAADASAG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33500.2	1e-112	CO-like family protein