PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022737613.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | MYB | ||||||||
Protein Properties | Length: 369aa MW: 42240.4 Da PI: 7.1911 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 52 | 1.6e-16 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEde+l ++++++G g+W+++++ g+ R++k+c++rw +yl XP_022737613.1 14 KGLWSPEEDEKLFNYITRFGVGCWSSVPKLAGLQRCGKSCRLRWINYL 61 678*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 46.5 | 8.3e-15 | 67 | 110 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg ++++E++l++++++ lG++ W+ Ia+ ++ gRt++++k++w++ XP_022737613.1 67 RGMFSQQEEDLIIRLHEFLGNR-WAQIAAQLP-GRTDNEIKNFWNS 110 788*******************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 369 aa Download sequence |
MGRHSCCLKQ KLRKGLWSPE EDEKLFNYIT RFGVGCWSSV PKLAGLQRCG KSCRLRWINY 60 LRPDLKRGMF SQQEEDLIIR LHEFLGNRWA QIAAQLPGRT DNEIKNFWNS CLKKKLMKQG 120 IDPTTHKPLS KVEVKEENKC TDKVVLQTPQ SKGLSSTVSS FAAHGPTFLV SDSSNYYGSG 180 LTEASRELFI NKQVYDPLTY IDLQAEIDHP SEYNSNFVPQ FHPSVRSFDQ NRFEINSSFT 240 FTSMPSLTNF DQGNMSRTDF SDISASRIST SFLLNEAKES SSNSSNISSY TEFQMNKMVE 300 NRAFSWDTGS TLDSMFQFQV NGIKPEELKP SSWQEEQLHN HNSVNISSYP LTLLSEDLTR 360 ANFDVFQQI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G26660.1 | 9e-85 | MYB family protein |