PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022737560.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 673aa MW: 73713.9 Da PI: 5.3485

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022737560.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39.1	1.3e-12	494	539	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +h e+Er+RR+++N++f Lr ++P+ K++Ka+ L A+ YI++L XP_022737560.1 494 NHVEAERQRREKLNQRFYALRAVVPNV-----SKMDKASLLGDAISYINEL 539 799*********************6.....5*************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 673 aa Download sequence
MTDYRLAPTM NLWTDDNASV MEAFMSTDLS ALWPPPQSSA STSTPAAAAA AAVGGPDVSK 60 SSFAAQYQPS VSLLNQETLQ QRLHALIEDA REYWTYAIFW QSSTSFDYSG TTILGWGDGY 120 YKGEEDKGKG KLKASTSTVV EQEYRKKVLR ELNSMISGST ATTDDAVDEE VTDTEWFFLV 180 SMMQSFVNGS GLPGQAFFNS SPVWIAGSDR LASSICERAR QGKVFGLQTM VCIPSANGVV 240 ELGSTELITQ SSDLMNKVRV LFNFNNGIEA GSWSMSNNTA DQGENDPSSL WISDPNNGVE 300 LKESNNNNTS NQNQQIQKSI QFCDNPSSSS LTENPSSIHV GNHDQQQNHQ QGQRFCLNFS 360 DYGFDGSSSV RNGNSSSHLL KPESGEILSF GESKKSGDGN LFTGNSHFVV EENKKKRSPT 420 SRGSNEEGML SFTSGVILPS SGVVKSSGGA GDSDHSDLEA SVVKEADSSR VVEPEKRPRK 480 RGRKPANGRE EPLNHVEAER QRREKLNQRF YALRAVVPNV SKMDKASLLG DAISYINELK 540 TKLQNADSEK EELQKQLEAM KKELASKDSG SAPPPPDQDL KMSNHLGNKL IELDIDVKII 600 GWDAMIRIQC PKKNHPAARL MAALKELDLD VHHASVSVVN DLMIQQATVK MGSRFYTQEQ 660 LRIALTSKVG DAR

Sequence ? help Back to Top

Protein Sequence Length: 673 aa Download sequence

MTDYRLAPTM NLWTDDNASV MEAFMSTDLS ALWPPPQSSA STSTPAAAAA AAVGGPDVSK  60
SSFAAQYQPS VSLLNQETLQ QRLHALIEDA REYWTYAIFW QSSTSFDYSG TTILGWGDGY  120
YKGEEDKGKG KLKASTSTVV EQEYRKKVLR ELNSMISGST ATTDDAVDEE VTDTEWFFLV  180
SMMQSFVNGS GLPGQAFFNS SPVWIAGSDR LASSICERAR QGKVFGLQTM VCIPSANGVV  240
ELGSTELITQ SSDLMNKVRV LFNFNNGIEA GSWSMSNNTA DQGENDPSSL WISDPNNGVE  300
LKESNNNNTS NQNQQIQKSI QFCDNPSSSS LTENPSSIHV GNHDQQQNHQ QGQRFCLNFS  360
DYGFDGSSSV RNGNSSSHLL KPESGEILSF GESKKSGDGN LFTGNSHFVV EENKKKRSPT  420
SRGSNEEGML SFTSGVILPS SGVVKSSGGA GDSDHSDLEA SVVKEADSSR VVEPEKRPRK  480
RGRKPANGRE EPLNHVEAER QRREKLNQRF YALRAVVPNV SKMDKASLLG DAISYINELK  540
TKLQNADSEK EELQKQLEAM KKELASKDSG SAPPPPDQDL KMSNHLGNKL IELDIDVKII  600
GWDAMIRIQC PKKNHPAARL MAALKELDLD VHHASVSVVN DLMIQQATVK MGSRFYTQEQ  660
LRIALTSKVG DAR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	476	484	KRPRKRGRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G17880.1	1e-95	bHLH family protein