PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_022737338.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
|
||||||||
Family | ARR-B | ||||||||
Protein Properties | Length: 1339aa MW: 151164 Da PI: 6.5625 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF702 | 46.3 | 1.5e-14 | 73 | 131 | 2 | 71 |
DUF702 2 rsgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasaaeaa 71 r+g+++CqdCGn+ kk+ C + f+C+t vk tWvpaakrr rqq +aa+++k++ + + + XP_022737338.1 73 RQGSMNCQDCGNKPKKEY----C------QVFQCQTDVKGTWVPAAKRRRRQQLTAAQQEKKKIFK-NTK 131 7899************84....2......47********************998888766554322.222 PP | |||||||
2 | G2-like | 88.3 | 7.1e-28 | 1099 | 1152 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++W+ eLH++F+ av++L G +kA+Pk+il+lm++kgLt+ehv+SHLQkYRl XP_022737338.1 1099 KPRIVWSVELHREFIAAVNKL-GLDKAVPKKILDLMNIKGLTREHVASHLQKYRL 1152 79*******************.********************************8 PP | |||||||
3 | Myb_DNA-binding | 40 | 9.3e-13 | 1103 | 1151 | 3 | 48 |
SS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 W+ e++ ++ av++lG + +k+I m+ kg+t++++ s++qky+ XP_022737338.1 1103 VWSVELHREFIAAVNKLGLDkaVPKKILDLMNiKGLTREHVASHLQKYR 1151 6***********************************************7 PP | |||||||
4 | Response_reg | 64.9 | 3.8e-22 | 919 | 1025 | 1 | 109 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHH CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealk 91 vl vdD+p ++++l+++l+k +y +v+++ ++ al++l+e++ +Dl++ +++p+mdG++ll+ e ++lp+i+++ah + + ++a+ XP_022737338.1 919 VLAVDDDPCFLKVLENMLRKCQY-HVTTTNQAITALKMLRENRnkYDLVISEVNLPDMDGFKLLELVVLE-MDLPVIMLSAHLD--TPIKAIT 1007 799********************.***************999889*******************988664.59*********98..999**** PP TTESEEEESS--HHHHHH CS Response_reg 92 aGakdflsKpfdpeelvk 109 Ga d+l Kp+ + el + XP_022737338.1 1008 HGACDCLLKPVRMTELKN 1025 *************99986 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 1339 aa Download sequence |
MTVMKLMYRR GRKKFGPNEG IYNKRFEIWS QYFHKQQQDV NNYSLEAGPS RRASELNLSD 60 ESSSRSAGFM IMRQGSMNCQ DCGNKPKKEY CQVFQCQTDV KGTWVPAAKR RRRQQLTAAQ 120 QEKKKIFKNT KTKLQLSVPK ASGSRLTELR KEEEWAAREI HLTGDKHNVS ELLSVPKASG 180 SGLTEPQKEE EWTAKEIHFT GNKHNVSELP KSPNCSSLIA VYLQGNYELT AIPPLFFQHM 240 ALLQVLDLSR TSIKSLPESL PKLVALKRLL LRGCELFMEL SPQVGKLKNL EELDLDETQI 300 MDLPREIGEL LKLRHFRVSF YHICGKKKGK SDIVIHPETI SSLSQLAQLS IDVNPEDKRW 360 EDSVEVVVKE VCNSKALRTL SLYLPRFQLL ENISFLYPSL SHFRFTVGHH KRRVISRVPA 420 EVEAKFRNGD KCLKFVNGEN IPIEIKGVLY YATSFFLDHH KTATNLSEFG IENMKWLKFC 480 LLAECNKMET LIDGEMHYER NEDDRSESDL GSVEHVLESL EYLSIYYMDN LGSIWRGPNR 540 YGCMSKLKFL ALHTCPQLIN IFSHSLLENF VNLEEIILED CPQVTSLLSH ASVKPKISDK 600 IFLPRLKRLL LLYLPELVSI SNGLLIAPKL ESIGCYNCPK LKSILKMELS SKTLKIIKGE 660 CQWWEDLNWN ETEWGNRPAY LMRIFSPINN EKDVMTQLAE DRDLLEATIE NEGQQPDDEK 720 LLDVSARDHK GQCSGYTEEI KTETDMITMS TPSVSPYLYE MQHGSIPMPL KMEEGPMYED 780 WNELAESQIR EMAYLEKKII EAEAELMPKV DVTSPTSEKG MNSDENVSIE SAHLSGPDCV 840 FANEYAGIAK VSIQDESQES EDENLFEVSK QADDQQTDGK AERERPILER NKKRSCLEKM 900 GGSTSEDGHM DRFPVGMRVL AVDDDPCFLK VLENMLRKCQ YHVTTTNQAI TALKMLRENR 960 NKYDLVISEV NLPDMDGFKL LELVVLEMDL PVIMLSAHLD TPIKAITHGA CDCLLKPVRM 1020 TELKNIWQHV VRRKKPDSED QINDPNQDKA RRGTGEAGQT STSSSDQKVK KKRKDQGEDE 1080 EAEGVDNGHE NEDPSTQKKP RIVWSVELHR EFIAAVNKLG LDKAVPKKIL DLMNIKGLTR 1140 EHVASHLQKY RLYLRRLACV ATQQANMSAA LGSKDPSYLG MGSLDGFGDL RTLTGPGMLS 1200 NTSLSSCQPG VMISGLNSSA ALSLRGISPG VIQPGHSQTL NNSIDGLGKI EPAVLPAKQN 1260 QNGTLFRGIP TSVELNQPSQ SKSTNHFGEF NSVNDPNVFG VATYFQDARV TVGSSSNSLF 1320 TASGNPLLLQ ANTQHTEGI |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 109 | 128 | KRRRRQQLTAAQQEKKKIFK |
2 | 1032 | 1074 | RRKKPDSEDQINDPNQDKARRGTGEAGQTSTSSSDQKVKKKRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G25180.1 | 1e-101 | ARR-B family protein |