PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022737210.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | NF-YC | ||||||||
Protein Properties | Length: 120aa MW: 13176.3 Da PI: 9.7753 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 106.9 | 1.3e-33 | 22 | 101 | 19 | 97 |
NF-YC 19 helPlarikkilk.adedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivp 97 h lPlarikki+k + +dvkmis eaP+++skacelfi elt rsw+ + krrtl+k d+++av tdifdfl++ v XP_022737210.1 22 HLLPLARIKKIMKkSGDDVKMISGEAPIVFSKACELFIEELTQRSWMVTMRGKRRTLNKEDVTSAVIATDIFDFLLNLVS 101 789*********825689*********************************************************99886 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 120 aa Download sequence |
MRQARTYSGI LSGGISGRTG PHLLPLARIK KIMKKSGDDV KMISGEAPIV FSKACELFIE 60 ELTQRSWMVT MRGKRRTLNK EDVTSAVIAT DIFDFLLNLV SDTGNSVEAA PLEMDISKSS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G54830.3 | 2e-31 | NF-YC family protein |