PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022737109.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 174aa MW: 20309.3 Da PI: 10.1022 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 92.9 | 1.5e-29 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien + rqvtfskRr g+lKKA ELSvLCdaev+viifs++g++yeyss XP_022737109.1 9 KRIENATSRQVTFSKRRSGLLKKARELSVLCDAEVSVIIFSQKGRVYEYSS 59 79***********************************************96 PP | |||||||
2 | K-box | 53.8 | 8.5e-19 | 82 | 157 | 9 | 84 |
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkke 84 e+ +++l+ e+a++ ++ie L+ +qR+llG++L+ +s+ eL+++e+qLe+sl++iR++K+++l e+ +l +k XP_022737109.1 82 EMERYTQQLRLEAANMVRKIELLEVSQRKLLGQGLGLCSVDELHEVESQLERSLRNIRARKERFLQEENAKLSEKV 157 66788999************************************************************99988875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 174 aa Download sequence |
MVRGKIQMKR IENATSRQVT FSKRRSGLLK KARELSVLCD AEVSVIIFSQ KGRVYEYSSS 60 DMQKAIERYS KYIKEVQNDK PEMERYTQQL RLEAANMVRK IELLEVSQRK LLGQGLGLCS 120 VDELHEVESQ LERSLRNIRA RKERFLQEEN AKLSEKVIPS FQNSIHIFTT SHES |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G62165.4 | 2e-69 | MIKC_MADS family protein |