PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022737108.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 212aa MW: 24345.9 Da PI: 10.03 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 92.4 | 2.2e-29 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien + rqvtfskRr g+lKKA ELSvLCdaev+viifs++g++yeyss XP_022737108.1 9 KRIENATSRQVTFSKRRSGLLKKARELSVLCDAEVSVIIFSQKGRVYEYSS 59 79***********************************************96 PP | |||||||
2 | K-box | 72.2 | 1.5e-24 | 82 | 170 | 9 | 97 |
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkk 97 e+ +++l+ e+a++ ++ie L+ +qR+llG++L+ +s+ eL+++e+qLe+sl++iR++K +ll+eqie+l+ ke+ lqeen +L++k XP_022737108.1 82 EMERYTQQLRLEAANMVRKIELLEVSQRKLLGQGLGLCSVDELHEVESQLERSLRNIRARKGHLLKEQIEQLKAKERFLQEENAKLSEK 170 66788999******************************************************************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 212 aa Download sequence |
MVRGKIQMKR IENATSRQVT FSKRRSGLLK KARELSVLCD AEVSVIIFSQ KGRVYEYSSS 60 DMQKAIERYS KYIKEVQNDK PEMERYTQQL RLEAANMVRK IELLEVSQRK LLGQGLGLCS 120 VDELHEVESQ LERSLRNIRA RKGHLLKEQI EQLKAKERFL QEENAKLSEK SGGGQWQLLT 180 QQKEAVTCSG QRSQSSEVET GLFIGLPENR GV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G62165.3 | 2e-80 | MIKC_MADS family protein |