PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022737038.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | ERF | ||||||||
Protein Properties | Length: 233aa MW: 25063.9 Da PI: 6.0844 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53.4 | 6.5e-17 | 75 | 122 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+G+r++ +g+Wv+eIr+p++ ++r++lg++ t+e+Aa+a++ a+++l+g XP_022737038.1 75 YRGIRRR--SGKWVSEIREPRK---TTRIWLGTYPTPEMAAAAYDVAALALKG 122 9***854..6*********843...5************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 233 aa Download sequence |
MADPNNPTNV PQLDQPSHPP VPSSSDHLNI QVPHPLITTS THTCENPSPT CDKLPPTTTP 60 KTTMASSSSG KHPMYRGIRR RSGKWVSEIR EPRKTTRIWL GTYPTPEMAA AAYDVAALAL 120 KGSEAVVNFP ASVASYPRPA STSSADIRKA AAAAASLKKA ETKSAETNLG IGHHHQAKNE 180 EMTEDYVDED VFLNLPNLLV DMAEGLLVSP PRISSAPSDD SPENSDGESL WSY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G52020.1 | 3e-44 | ERF family protein |