PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022736694.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family HD-ZIP
Protein Properties Length: 747aa    MW: 82150.5 Da    PI: 5.7856
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022736694.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox68.11.1e-2154109156
                     TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                     ++k +++t++q++eLe++F+++++p++++r eL+++lgL+ +q+k+WFqNrR+++k
  XP_022736694.1  54 KKKYHRHTPHQIQELESFFKECPHPDEKQRMELSRRLGLESKQIKFWFQNRRTQMK 109
                     79999************************************************999 PP
2START1723.9e-542564773205
                     HHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEEEE CS
           START   3 aeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetlev 84 
                     a++a++el+k+a+ + p+W k      e +n +e++++f++  +     +++ea r++g+v+     lve+l+d++ +W e+++    +a+t++v
  XP_022736694.1 256 ALAAMDELIKMAQMDNPLWIKGLdggmETLNLEEYRRTFSSRIGikpsgYTTEATRETGLVFLRGLALVETLMDVN-RWAEMFPcmisRAATVDV 349
                     689********************9*999***********99888********************************.****************** PP

                     ECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE- CS
           START  85 issg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehvdl 172
                     +ssg      +alq++ ae+q+lspl p R + f+R+++q+++g+w++vdvS+d  q+  ++  +   ++lpSg++i++++n +skvtwveh ++
  XP_022736694.1 350 LSSGtgvtrdNALQVIDAEFQVLSPLIPvRHVRFIRCCKQHSEGVWAVVDVSIDAIQDAASTLMFPNYKRLPSGCVIQDMDNKYSKVTWVEHSEY 444
                     **********************************************************999888889999************************* PP

                     -SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXX CS
           START 173 kgrlphwllrslvksglaegaktwvatlqrqce 205
                     +++++h llr+l++sg  +ga++wvatlqrqc 
  XP_022736694.1 445 DESTIHHLLRPLISSGFGFGAQRWVATLQRQCD 477
                     *******************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 747 aa     Download sequence    
MDGHGEMGLI GENFDPGLVG RMREDGYESR SGSGNFEGAS GDDQDATDDG PPKKKKYHRH  60
TPHQIQELES FFKECPHPDE KQRMELSRRL GLESKQIKFW FQNRRTQMKT QLERHENVIL  120
RQENDKLRAE NDLLKQAITS PICNSCGGPA VPGEISYEQH QLRIENARLK DELSRICALT  180
NKFLGRPLSS SASPIPSQGL NSNLELAVGR NGFGGLNNAG TTLPMGFEFV DGDMTPLMKS  240
LANEMPYDRS AFVDAALAAM DELIKMAQMD NPLWIKGLDG GMETLNLEEY RRTFSSRIGI  300
KPSGYTTEAT RETGLVFLRG LALVETLMDV NRWAEMFPCM ISRAATVDVL SSGTGVTRDN  360
ALQVIDAEFQ VLSPLIPVRH VRFIRCCKQH SEGVWAVVDV SIDAIQDAAS TLMFPNYKRL  420
PSGCVIQDMD NKYSKVTWVE HSEYDESTIH HLLRPLISSG FGFGAQRWVA TLQRQCDCLA  480
VLMSPDILGE DDTGITTAGR KSVLKLAQRM TCNFCSGVCA SSMHKWDRLS VGNVGEDVRV  540
MTRKNINDPG EPHGVVLSAS TSVWMPITQQ RLFDFLRDER MRSHWDILSN GGPMQEVVNV  600
AKGPQQGNCV SLVRGTAINA NENNMLILQE TWSDASGALV VYAPVDMSSM SVVMNGGDSA  660
YVALLPSGFA ILPGISPSYR GGQSNSNGPL MKPDIDGSIS SGCLLTVGFQ ILVNSIPTAK  720
LTVESVETVN NLISCTIQKI KAALTLT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00730.10.0HD-ZIP family protein