PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022736601.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GRAS
Protein Properties Length: 627aa    MW: 67896.8 Da    PI: 6.5269
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022736601.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS3435e-1052596272374
            GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96 
                     +++++e+A a+s+g+   ++++L+rl + a+ +g++ qRl  +++ AL++r+++    l ++ p+ e     s+e++aa++l+++ sP++k+++l
  XP_022736601.1 259 KQTIMEAASAISEGKIDVVNEILTRLAQVANGKGNSEQRLMECMLLALKSRVNS----LENTPPVAELF---SKEHAAATQLLYDRSPCFKLGFL 346
                     5789*************************************************9....55555555554...99********************* PP

            GRAS  97 taNqaIleavege...ervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrle 187
                     +a  aIl+a+  +   +++H+iDfdi+qG+Q+  Ll+aL++R +g p +++iT++++  +g  e+l+ + + L+++A+++g+ ++fnv++  +l+
  XP_022736601.1 347 AAHMAILDATLDQpscNKLHVIDFDIGQGGQYRDLLHALSERGRGNPaMVKITAIAD--NGGDERLKMVDDTLSQIADRFGICLKFNVVAGLKLS 439
                     *********998878899************************955554*********..77***************************9888*** PP

            GRAS 188 dleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseer 282
                     dl+ e+L ++p+E laVn++++l+r++desvs+e++rde+L+ vk+l P+vv++veqe+++n+++F+ r+ ea+ yy alf+s+e +++re+ er
  XP_022736601.1 440 DLSRESLGCEPDEPLAVNFAFKLYRMPDESVSVENPRDELLRRVKGLAPRVVTLVEQEINTNTAPFASRVGEACGYYGALFESIELTVSREKPER 534
                     *********************************************************************************************** PP

            GRAS 283 ikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklll.rkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     +k++++ l r+i n vaceg++r+er+e ++kWr+r+++aGF+  pls+++a+++++ l      + g++v+ee+g + +gW++r+L+++SaWr
  XP_022736601.1 535 VKLDEA-LMRKIANSVACEGRDRVERCEVFGKWRARMSMAGFELKPLSQNVAESMRAGLiYGKRvNPGFTVKEENGGVSFGWMGRTLTVASAWR 627
                     ******.99*******************************************999874413333589**************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 627 aa     Download sequence    
MASGFSGGGS DFYGGITGRS VAKTGIMSNN QPTAPYGPQV HGIFVDQASQ IMNRATPSLI  60
GKRTLADFQT QQLQNNHAGL SSLYIRSVKP RTYQNASPIS PLSPTDMSSN MLPDVTSNFS  120
SPSCLSQRNG VPLLQQLRPQ QLRLGITSGA TIQAVSPGLS GAQFMKPVQG RVVQAQDPEK  180
KMMNQLQELE KQLLDDDNDE EGDAVSVITN NNSEWSETIQ NLVSSGSPNN PIAPSPTSST  240
TSSSSSTSSA ASPSSTCSKQ TIMEAASAIS EGKIDVVNEI LTRLAQVANG KGNSEQRLME  300
CMLLALKSRV NSLENTPPVA ELFSKEHAAA TQLLYDRSPC FKLGFLAAHM AILDATLDQP  360
SCNKLHVIDF DIGQGGQYRD LLHALSERGR GNPAMVKITA IADNGGDERL KMVDDTLSQI  420
ADRFGICLKF NVVAGLKLSD LSRESLGCEP DEPLAVNFAF KLYRMPDESV SVENPRDELL  480
RRVKGLAPRV VTLVEQEINT NTAPFASRVG EACGYYGALF ESIELTVSRE KPERVKLDEA  540
LMRKIANSVA CEGRDRVERC EVFGKWRARM SMAGFELKPL SQNVAESMRA GLIYGKRVNP  600
GFTVKEENGG VSFGWMGRTL TVASAWR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52510.10.0GRAS family protein