PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022736484.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

TCP

Protein Properties

Length: 367aa MW: 40606.9 Da PI: 6.2429

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022736484.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	95.8	8.4e-30	50	182	3	125
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec....eaesssssasnsssg..... 88 g+kdrhsk++T +g+RdRR+Rls+++a++++dLqd+LG+ ++sk i+WLl + k i++l+ ++ ++ +s++s+as+ss + XP_022736484.1 50 GGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDRLGLSQPSKVIDWLLDATKDDIDKLPPLQMPQGFGQfhqpMLVSHESNASQSSLApffda 144 79*************************************************************55555222322222333333333333356654 PP TCP 89 ...........kaaksaakskksqksaasalnlak.esrakarararer 125 + + a+ ++ ++ ra++++ +re+ XP_022736484.1 145 nsmfikdggedQ-----------SIAAKRYWDTMDaALRARSNEVERES 182 222333332221...........22222222222223333333333332 PP

Sequence ? help Back to Top
Protein Sequence Length: 367 aa Download sequence
MISSSKEKSF QAKQEASETN DSKVSKGPSS SRQWPGFRNP RIVRVSRSFG GKDRHSKVCT 60 IRGLRDRRIR LSVPTAIQLY DLQDRLGLSQ PSKVIDWLLD ATKDDIDKLP PLQMPQGFGQ 120 FHQPMLVSHE SNASQSSLAP FFDANSMFIK DGGEDQSIAA KRYWDTMDAA LRARSNEVER 180 ESTTAAAAAA AEKGKWIKIN EEQNQDGNIG DYTSGQASSL ELFPNAMPFN SYYHWEPSSL 240 SLSQFGNHGF LPQTENFLDG NTTVPLPSSL SLPSAHAPQL FFCPPSTMPS LFPTYPLYGT 300 TPGPGDSSDS RQMNRFQLLS SNSQHFLPNS FTMSSPMKPF SLNVNAGLTH TQNDDESHAD 360 DQDNTNS

Sequence ? help Back to Top

Protein Sequence Length: 367 aa Download sequence

MISSSKEKSF QAKQEASETN DSKVSKGPSS SRQWPGFRNP RIVRVSRSFG GKDRHSKVCT  60
IRGLRDRRIR LSVPTAIQLY DLQDRLGLSQ PSKVIDWLLD ATKDDIDKLP PLQMPQGFGQ  120
FHQPMLVSHE SNASQSSLAP FFDANSMFIK DGGEDQSIAA KRYWDTMDAA LRARSNEVER  180
ESTTAAAAAA AEKGKWIKIN EEQNQDGNIG DYTSGQASSL ELFPNAMPFN SYYHWEPSSL  240
SLSQFGNHGF LPQTENFLDG NTTVPLPSSL SLPSAHAPQL FFCPPSTMPS LFPTYPLYGT  300
TPGPGDSSDS RQMNRFQLLS SNSQHFLPNS FTMSSPMKPF SLNVNAGLTH TQNDDESHAD  360
DQDNTNS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60970.1	5e-60	TCP family protein