PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_022736160.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
|
||||||||
Family | TCP | ||||||||
Protein Properties | Length: 387aa MW: 41580.7 Da PI: 9.4626 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 116.3 | 4e-36 | 85 | 191 | 2 | 98 |
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssa............seceaesssssasn 84 a k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++t+ WLl+ a++ai+e+tgt++ +a + + +++s+++++n XP_022736160.1 85 ASKRSSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETVRWLLEHAEQAIIEATGTGTVPAiavsvggtlkipTTSGTNASNNNNNN 179 7899************************************************************7777744333333222111122222222222 PP TCP 85 sssgkaaksaaksk 98 ++++++a+++ k XP_022736160.1 180 NRIDDSARKKR--K 191 22222222221..1 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 387 aa Download sequence |
MDPDDGVTSD LSTSAGEPNT ATASDNINKK DKNYENSPFQ IMPLKEEPIE SDHKTHPTPP 60 IGVVPVAMQI QQMPIQIPMP MPVNASKRSS TKDRHTKVEG RGRRIRIPAT CAARIFQLTR 120 ELGHKSDGET VRWLLEHAEQ AIIEATGTGT VPAIAVSVGG TLKIPTTSGT NASNNNNNNN 180 RIDDSARKKR KRPANSEFCD INEGISFAVS QQQQQLVTQA SGLAPVTPQG LVPVWTVGNS 240 GMMVPANAFW MIPQPTATAA GNVLTNQQPS PQIWALSPSL TPVFNVSARP ISSFVTTTNQ 300 VQPVVYNNGL STSAVNASST PVGATVAKRS TMAPSVSSVG NDSGSIGNRG KAQMLRDFSL 360 EIYDKQELQF MGRSENHHQH MQAASKQ |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 187 | 192 | RKKRKR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G51910.2 | 2e-62 | TCP family protein |