PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022736160.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family TCP
Protein Properties Length: 387aa    MW: 41580.7 Da    PI: 9.4626
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022736160.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP116.34e-3685191298
             TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssa............seceaesssssasn 84 
                     a k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++t+ WLl+ a++ai+e+tgt++ +a            + + +++s+++++n
  XP_022736160.1  85 ASKRSSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETVRWLLEHAEQAIIEATGTGTVPAiavsvggtlkipTTSGTNASNNNNNN 179
                     7899************************************************************7777744333333222111122222222222 PP

             TCP  85 sssgkaaksaaksk 98 
                     ++++++a+++   k
  XP_022736160.1 180 NRIDDSARKKR--K 191
                     22222222221..1 PP

Sequence ? help Back to Top
Protein Sequence    Length: 387 aa     Download sequence    
MDPDDGVTSD LSTSAGEPNT ATASDNINKK DKNYENSPFQ IMPLKEEPIE SDHKTHPTPP  60
IGVVPVAMQI QQMPIQIPMP MPVNASKRSS TKDRHTKVEG RGRRIRIPAT CAARIFQLTR  120
ELGHKSDGET VRWLLEHAEQ AIIEATGTGT VPAIAVSVGG TLKIPTTSGT NASNNNNNNN  180
RIDDSARKKR KRPANSEFCD INEGISFAVS QQQQQLVTQA SGLAPVTPQG LVPVWTVGNS  240
GMMVPANAFW MIPQPTATAA GNVLTNQQPS PQIWALSPSL TPVFNVSARP ISSFVTTTNQ  300
VQPVVYNNGL STSAVNASST PVGATVAKRS TMAPSVSSVG NDSGSIGNRG KAQMLRDFSL  360
EIYDKQELQF MGRSENHHQH MQAASKQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1187192RKKRKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51910.22e-62TCP family protein