PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022736132.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

TCP

Protein Properties

Length: 407aa MW: 43709.9 Da PI: 7.7353

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022736132.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	132.2	5e-41	86	190	2	104
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssgkaaksaa 95 ++k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLlqqa+pa++++tgt++++a+++ + s +ss+s+ s +++ +s+ XP_022736132.1 86 PPKRTSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTsLNISLRSSGSSMSVPSQLRSSG 180 789******************************************************************99988888888888777776666665 PP TCP 96 .kskksqksa 104 +s++s ++ XP_022736132.1 181 fNSNFSMQQR 190 5555555554 PP

Sequence ? help Back to Top
Protein Sequence Length: 407 aa Download sequence
MEGGGSDDHQ LHHHHHHHLH HHHQQHHRPN FPFQLLEKKE EDNQPCSSSS SPPFPSLPAS 60 SSADQPNTTR SIASLQISPE PSKKPPPKRT STKDRHTKVD GRGRRIRMPA LCAARVFQLT 120 RELGHKSDGE TIEWLLQQAE PAVIAATGTG TIPANFTSLN ISLRSSGSSM SVPSQLRSSG 180 FNSNFSMQQR RSLFPGIGLE TNPTFLNFHS SSNLNSMFQA KQELRDNSTS LEISDTEEGT 240 LGRKRRPEQD LSVQHQMGSY LLQSSTGEIP ASHGQIPANF WMVTNSNNQV MSGDPIWTFP 300 SVNNSALYRG TMSSGLHFMN FPTPMALLPG QQLGSSSVTS GSGGGGGSGG SSGISEGHLN 360 MLTGLNPYRQ VSGSGVSESQ ASGSHSQHGG GGGGGGDDRH DTTSHHS

Sequence ? help Back to Top

Protein Sequence Length: 407 aa Download sequence

MEGGGSDDHQ LHHHHHHHLH HHHQQHHRPN FPFQLLEKKE EDNQPCSSSS SPPFPSLPAS  60
SSADQPNTTR SIASLQISPE PSKKPPPKRT STKDRHTKVD GRGRRIRMPA LCAARVFQLT  120
RELGHKSDGE TIEWLLQQAE PAVIAATGTG TIPANFTSLN ISLRSSGSSM SVPSQLRSSG  180
FNSNFSMQQR RSLFPGIGLE TNPTFLNFHS SSNLNSMFQA KQELRDNSTS LEISDTEEGT  240
LGRKRRPEQD LSVQHQMGSY LLQSSTGEIP ASHGQIPANF WMVTNSNNQV MSGDPIWTFP  300
SVNNSALYRG TMSSGLHFMN FPTPMALLPG QQLGSSSVTS GSGGGGGSGG SSGISEGHLN  360
MLTGLNPYRQ VSGSGVSESQ ASGSHSQHGG GGGGGGDDRH DTTSHHS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47620.1	5e-50	TCP family protein