PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022735659.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family YABBY
Protein Properties Length: 308aa    MW: 34557.6 Da    PI: 9.0145
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022735659.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY153.71.7e-47101582163
           YABBY   2 dvfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsv 96 
                     d++ +se++Cyv+CnfCnt+lav +P + l+ +vtv+CGhC++l  ++ +           l+ +  ++++  + +e++++   + ++ ++s+s 
  XP_022735659.1  10 DLVPQSEHLCYVRCNFCNTVLAVGIPCKRLLDTVTVKCGHCSNLSFLSTRPP---------LQGQCLDPQTSLTLQEKQSF-CGDFRKGTQSSSP 94 
                     78899*************************************9855333333.........33333333333333333333.3344444455444 PP

           YABBY  97 sseklsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahf 163
                     ss   s++++ ++p++p v++PPek+ r Psaynrf+keeiqrika+nP+i hreafsaaaknWa +
  XP_022735659.1  95 SS---STSSEPSSPKAPFVVKPPEKKHRLPSAYNRFMKEEIQRIKAANPEIPHREAFSAAAKNWARY 158
                     44...56778899****************************************************76 PP
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    
MNLDEKVGMD LVPQSEHLCY VRCNFCNTVL AVGIPCKRLL DTVTVKCGHC SNLSFLSTRP  60
PLQGQCLDPQ TSLTLQEKQS FCGDFRKGTQ SSSPSSSTSS EPSSPKAPFV VKPPEKKHRL  120
PSAYNRFMKE EIQRIKAANP EIPHREAFSA AAKNWARYIP NSPAASSASA SSRNVRKQDT  180
IMINEVIIHE SATKTKLRDS PGIWRMTTSK NLDCVKCDLA IYFATLMSKD FRFDNEEDLL  240
ILRENLRLLS MALSIYEQLN TLRNHFLQTA NLVSTTPNHY LNSITYPMKS SAPNDFSSQI  300
SKLQKTCI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69180.12e-69YABBY family protein