PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022735623.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 564aa MW: 63975.1 Da PI: 8.1876

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022735623.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	38.9	1.5e-12	305	348	7	55
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 Er+RR++i++++++Lr l+Pk + K++ +iL+ A+eYI +Lq XP_022735623.1 305 VTERNRRKKIKDGLFKLRALVPKiS------KMDRTAILTDAIEYIGDLQ 348 57*******************66......***************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 564 aa Download sequence
MRGFERAVEW LRPFVDSKTW DFCVVWKLGD DPSRFIEWKD CCCSGGIHVK VEKDESQQHL 60 GPLCRDAHFQ HSIRSKACEA LSHFPFVMSL YAGSHGEVAM SNQPNWVNHA NASGSDSSHE 120 TMGTQVLIPV FGGLIELFAS KHIPKDQNII ELVTTQCNAL LKPEVTTAES YTKENLDKWY 180 HNALLEKDLH NLPFSISLST FIPRIQSIPL ASDSNSHPSL DGSSRGPSPS VEHPPFASGS 240 ACSSQDEQLK QLIGTYNGTK RLRCSKNVSE QQAVFVLDHK TNSVNDKIRT TKKPEKENYH 300 SKNLVTERNR RKKIKDGLFK LRALVPKISK MDRTAILTDA IEYIGDLQEE KKKLQNELTK 360 IEEEDCEKSN LELKSAKLDK LHKDMSAVKQ NQVSSGLADM EKMEVHVEVN QITKREFLIK 420 LYYEHKRGGF AKLMEGIDSL GLRVIDANVT TFNGKVLNIF KVEELVMSDF PLGLIFSANT 480 VSVTLMLGKQ GFSFQEIERL VDRPTELDKS DSCFHIQYRK CRLRVRQCTV KWTARLRDKK 540 PFHSCNFTSS CSINHDSELL AVKI

Sequence ? help Back to Top

Protein Sequence Length: 564 aa Download sequence

MRGFERAVEW LRPFVDSKTW DFCVVWKLGD DPSRFIEWKD CCCSGGIHVK VEKDESQQHL  60
GPLCRDAHFQ HSIRSKACEA LSHFPFVMSL YAGSHGEVAM SNQPNWVNHA NASGSDSSHE  120
TMGTQVLIPV FGGLIELFAS KHIPKDQNII ELVTTQCNAL LKPEVTTAES YTKENLDKWY  180
HNALLEKDLH NLPFSISLST FIPRIQSIPL ASDSNSHPSL DGSSRGPSPS VEHPPFASGS  240
ACSSQDEQLK QLIGTYNGTK RLRCSKNVSE QQAVFVLDHK TNSVNDKIRT TKKPEKENYH  300
SKNLVTERNR RKKIKDGLFK LRALVPKISK MDRTAILTDA IEYIGDLQEE KKKLQNELTK  360
IEEEDCEKSN LELKSAKLDK LHKDMSAVKQ NQVSSGLADM EKMEVHVEVN QITKREFLIK  420
LYYEHKRGGF AKLMEGIDSL GLRVIDANVT TFNGKVLNIF KVEELVMSDF PLGLIFSANT  480
VSVTLMLGKQ GFSFQEIERL VDRPTELDKS DSCFHIQYRK CRLRVRQCTV KWTARLRDKK  540
PFHSCNFTSS CSINHDSELL AVKI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G16910.1	2e-79	bHLH family protein