PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022735590.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

C2H2

Protein Properties

Length: 409aa MW: 46421.5 Da PI: 8.8699

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022735590.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	18.7	4.7e-06	56	78	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C++C++ F r nL+ H r+H XP_022735590.1 56 YVCEICNQGFQRDQNLQMHRRRH 78 9*********************9 PP
2	zf-C2H2	16.2	3e-05	133	155	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k + +s++k H++t+ XP_022735590.1 133 WVCEKCSKGYAVQSDYKAHLKTC 155 58*******************98 PP
3	zf-C2H2	12.5	0.00043	161	180	3	22
ETTTTEEESSHHHHHHHHHH CS zf-C2H2 3 CpdCgksFsrksnLkrHirt 22 C dCg++Fsr +++ H+ XP_022735590.1 161 CCDCGRVFSRVESFIEHQDA 180 *****************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 409 aa Download sequence
MLANNFCSSV PSSEPFSCLE NGNNNNKRTR RPAGTPDPDA EVVSLSPKTL LESDHYVCEI 60 CNQGFQRDQN LQMHRRRHKV PWKLFKRETP VVRKRVFVCP EPSCLHHDPC HALGDLVGIK 120 KHFRRKHSNH KQWVCEKCSK GYAVQSDYKA HLKTCGTRGH CCDCGRVFSR VESFIEHQDA 180 CYMGSIRPEP QALQPACLSR TASTPSPSSD TNFNIARRPS LVLAKTTDTM FLSPTKDNSP 240 KKVYYNNLEL QLSTTSNTTD FSFSPKKDDN HSTQLQLSVG SSDIGEKIEP TVTCKNKDAS 300 KKSTHQEIHE KPDFVASRLK EQAHQQLRLA IAEKAYAEEA TKQTKRQIEL AEQEFAKAKR 360 IRQQAQAELE QAHALKDHAI KQINSTILQI TCHACKQQFQ EEDLPKRTL

Sequence ? help Back to Top

Protein Sequence Length: 409 aa Download sequence

MLANNFCSSV PSSEPFSCLE NGNNNNKRTR RPAGTPDPDA EVVSLSPKTL LESDHYVCEI  60
CNQGFQRDQN LQMHRRRHKV PWKLFKRETP VVRKRVFVCP EPSCLHHDPC HALGDLVGIK  120
KHFRRKHSNH KQWVCEKCSK GYAVQSDYKA HLKTCGTRGH CCDCGRVFSR VESFIEHQDA  180
CYMGSIRPEP QALQPACLSR TASTPSPSSD TNFNIARRPS LVLAKTTDTM FLSPTKDNSP  240
KKVYYNNLEL QLSTTSNTTD FSFSPKKDDN HSTQLQLSVG SSDIGEKIEP TVTCKNKDAS  300
KKSTHQEIHE KPDFVASRLK EQAHQQLRLA IAEKAYAEEA TKQTKRQIEL AEQEFAKAKR  360
IRQQAQAELE QAHALKDHAI KQINSTILQI TCHACKQQFQ EEDLPKRTL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01940.1	1e-124	C2H2 family protein