PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022735359.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

SBP

Protein Properties

Length: 458aa MW: 50410.6 Da PI: 8.8296

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022735359.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	126.6	9.7e-40	118	193	1	76
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkk 76 +Cqv gC++dls+ k+yh+rhkvCe+hsk+++v+v+g+eqrfCqqCsrfh l fD++krsCr+rLa+hnerrrk XP_022735359.1 118 CCQVFGCNKDLSSSKDYHKRHKVCEAHSKTAKVIVNGIEQRFCQQCSRFHLLAAFDDGKRSCRKRLAGHNERRRKL 193 6*************************************************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 458 aa Download sequence
MESWSYGSEG KDLLFTDEMD LPVDAFARSR KGLVGWDLKA SNSEAVESME FMDFGFADMN 60 KKPFYGNTSM GIFGAEFVND SVKKDGKFLK ETSVVSSVRP ALMVKNARTT SSNSHTPCCQ 120 VFGCNKDLSS SKDYHKRHKV CEAHSKTAKV IVNGIEQRFC QQCSRFHLLA AFDDGKRSCR 180 KRLAGHNERR RKLHFNTLSG KPNKLLQSYQ GTKIVGTSIP KRTPFVIPNI FQDDLVYPER 240 YGQASQYQQV KSEEKPNYSS QSAIPMSNGQ LQPKSFFHMH GSGKQNVPGT FSSATEVFNA 300 PNTASTVKEL SGVARSNCAL SLLSAQSQNL SSHAIGIQMS RSLINQSGQA HHSSGKSAAA 360 SFLEKANGFY SCGMNPVGVG QAGSVVVSDA GHTVNFEVQA DGYFQDSGLL SARYCLSPEN 420 GTTIDLLQLS THLQRVEQQR NSIQVKQENE DLCYFLTT

Sequence ? help Back to Top

Protein Sequence Length: 458 aa Download sequence

MESWSYGSEG KDLLFTDEMD LPVDAFARSR KGLVGWDLKA SNSEAVESME FMDFGFADMN  60
KKPFYGNTSM GIFGAEFVND SVKKDGKFLK ETSVVSSVRP ALMVKNARTT SSNSHTPCCQ  120
VFGCNKDLSS SKDYHKRHKV CEAHSKTAKV IVNGIEQRFC QQCSRFHLLA AFDDGKRSCR  180
KRLAGHNERR RKLHFNTLSG KPNKLLQSYQ GTKIVGTSIP KRTPFVIPNI FQDDLVYPER  240
YGQASQYQQV KSEEKPNYSS QSAIPMSNGQ LQPKSFFHMH GSGKQNVPGT FSSATEVFNA  300
PNTASTVKEL SGVARSNCAL SLLSAQSQNL SSHAIGIQMS RSLINQSGQA HHSSGKSAAA  360
SFLEKANGFY SCGMNPVGVG QAGSVVVSDA GHTVNFEVQA DGYFQDSGLL SARYCLSPEN  420
GTTIDLLQLS THLQRVEQQR NSIQVKQENE DLCYFLTT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69170.1	5e-55	SBP family protein