PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022735317.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

TCP

Protein Properties

Length: 374aa MW: 40514.9 Da PI: 8.7119

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022735317.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	128	9.4e-40	53	161	2	89
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg....... 88 ++k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLlqqa+pa++++tgt++++a+++ + s +ss+s+ s++ XP_022735317.1 53 PAKRSSSKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTsLNISLRSSGSSISAShlrntyf 147 6899*****************************************************************99975666666655332223334444 PP TCP 89 .............k 89 + XP_022735317.1 148 npnfstqqlrirsD 161 44444444444440 PP

Sequence ? help Back to Top
Protein Sequence Length: 374 aa Download sequence
MIMDGETENG IRRPNFPLQL LEKKEQEQEQ PCSNTSNAET SSKTSLEPPK KPPAKRSSSK 60 DRHTKVDGRG RRIRMPATCA ARVFQLTREL GHKSDGETIE WLLQQAEPAV IAATGTGTIP 120 ANFTSLNISL RSSGSSISAS HLRNTYFNPN FSTQQLRIRS DWERTVLDDS SQQQRRILFP 180 GVALPSEDSL NFPSSSSVNA FLQAKQEYRD ASLDVTQVAA DTSIGKKRRP EQQELSQNQV 240 GSSLIQSSTG SIPASHNPIP TTFWMVTNPS NQVVSGSGTG DPLWTFPSAS NTNLYRGNMS 300 SGVHFMNFAT PMALLPGQQL GSGIGAGGLV TDSHLGVLTA LNSYRPIPGT SVSESSASGS 360 HQHHGGEDRH DSTR

Sequence ? help Back to Top

Protein Sequence Length: 374 aa Download sequence

MIMDGETENG IRRPNFPLQL LEKKEQEQEQ PCSNTSNAET SSKTSLEPPK KPPAKRSSSK  60
DRHTKVDGRG RRIRMPATCA ARVFQLTREL GHKSDGETIE WLLQQAEPAV IAATGTGTIP  120
ANFTSLNISL RSSGSSISAS HLRNTYFNPN FSTQQLRIRS DWERTVLDDS SQQQRRILFP  180
GVALPSEDSL NFPSSSSVNA FLQAKQEYRD ASLDVTQVAA DTSIGKKRRP EQQELSQNQV  240
GSSLIQSSTG SIPASHNPIP TTFWMVTNPS NQVVSGSGTG DPLWTFPSAS NTNLYRGNMS  300
SGVHFMNFAT PMALLPGQQL GSGIGAGGLV TDSHLGVLTA LNSYRPIPGT SVSESSASGS  360
HQHHGGEDRH DSTR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G47620.1	5e-46	TCP family protein