PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022735303.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GRAS
Protein Properties Length: 770aa    MW: 83836.1 Da    PI: 6.4734
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022735303.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS424.68.2e-1303957532374
            GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96 
                      +lLl+cAeavs++++e+a+++L +ls+l++p g++ qR+aayf eA++arl++s+ ++++alp+ ++s  ++++ ++a+++f+ +sP++kfsh+
  XP_022735303.1 395 LTLLLQCAEAVSANNFEEANRMLLELSQLSTPFGTSAQRVAAYFSEAMSARLVSSCLGICAALPSIPQS--HTQKMVSAFQVFNGISPFVKFSHF 487
                     579************************************************************999998..5899999***************** PP

            GRAS  97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledlel 191
                     taNqaI ea+e+eervHiiD+di+qGlQWp L++ LasRp+gpp++R+Tg+g     s e+le+tg+rL++fA++lg+pfef + va+++ +le+
  XP_022735303.1 488 TANQAIQEAFEREERVHIIDLDIMQGLQWPGLFHILASRPGGPPHVRLTGLGT----SLEALEATGKRLSDFADKLGLPFEFCP-VADKVGNLEP 577
                     *****************************************************....9**************************.7********* PP

            GRAS 192 eeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvE 286
                     e+L+v+++Ea+aV++    h+l+d ++s ++    +L+l+++l Pkvv+vveq+++h ++sFl rf+ea++yysalfdsl a++++es+er++vE
  XP_022735303.1 578 ERLNVSKREAVAVHWLQ--HSLYDVTGSDTN----TLWLLQRLAPKVVTVVEQDLSH-AGSFLGRFVEAIHYYSALFDSLGASYGEESQERHVVE 665
                     ****************9..999999999999....**********************.899********************************** PP

            GRAS 287 rellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     ++ll++ei+nv+a  g +r  ++ ++++Wre+l+++GFk ++l  +aa+qa lll +++sdgy++ e++g+l lgWkd  L+++SaWr
  XP_022735303.1 666 QQLLSKEIRNVLALGGPSRSDQEVKFHNWREKLQQSGFKGISLAGNAATQATLLLGMFPSDGYTLVEDNGALKLGWKDLCLLTASAWR 753
                     ***************************************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 770 aa     Download sequence    
MAACDFVGEN GSEIKGSSNS LENPVTSASN SNTSERKMMR KRMASEIADY HRFPRRSLAS  60
ENMGCSFLAA ATTNNNPNPL PNHSTTNMNT NIIPFANFTT VTSGGPAFLS TTTSNFTCID  120
TLSTNNPQPP AVCGFSGLPL FPPTDRNRNT AAAATTTATT APGSLTPISN SMDDTSATPW  180
IDGIIRDLIH TCSNVSISQL IHNVREIIYP CNSNLAAILE YRLRSLMDPL ERKTKEAPTL  240
HLPEGLLQRH HSQQQGSSGL TLNLDSALDS LPNYSLTESC AMSQYFNWGL TPLPISNSAA  300
TGNNQQHHHN QISSSPSATT PPVLSLNQTQ SQVPQHHQTQ EQMPPAENPS PVEKTTSTAT  360
TTPTSTVQTV QACGARDRKE ELRQQKKDEE GLHLLTLLLQ CAEAVSANNF EEANRMLLEL  420
SQLSTPFGTS AQRVAAYFSE AMSARLVSSC LGICAALPSI PQSHTQKMVS AFQVFNGISP  480
FVKFSHFTAN QAIQEAFERE ERVHIIDLDI MQGLQWPGLF HILASRPGGP PHVRLTGLGT  540
SLEALEATGK RLSDFADKLG LPFEFCPVAD KVGNLEPERL NVSKREAVAV HWLQHSLYDV  600
TGSDTNTLWL LQRLAPKVVT VVEQDLSHAG SFLGRFVEAI HYYSALFDSL GASYGEESQE  660
RHVVEQQLLS KEIRNVLALG GPSRSDQEVK FHNWREKLQQ SGFKGISLAG NAATQATLLL  720
GMFPSDGYTL VEDNGALKLG WKDLCLLTAS AWRPFDANAA GATTIHRCSR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54220.10.0GRAS family protein