PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022735225.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

C2H2

Protein Properties

Length: 596aa MW: 64003.2 Da PI: 9.0956

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022735225.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.1	3.1e-05	71	93	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C+ C+k F r nL+ H r H XP_022735225.1 71 FICEVCNKGFQREQNLQLHRRGH 93 89*******************88 PP
2	zf-C2H2	13.1	0.00029	147	169	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k++ +s+ k H +t+ XP_022735225.1 147 WKCEKCSKRYAVQSDWKAHSKTC 169 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 596 aa Download sequence
MATASSSTLF FGTRDENQNQ MIQQQSSITP TSSTALTTAP QKKKRNQPGT PNPDAEVIAL 60 SPKTLMATNR FICEVCNKGF QREQNLQLHR RGHNLPWKLK QKTTKEVKRK VYLCPEPTCV 120 HHDPSRALGD LTGIKKHYSR KHGEKKWKCE KCSKRYAVQS DWKAHSKTCG TREYRCDCGT 180 LFSRRDSFIT HRAFCDALAQ ESARHPTKLS TLGSHHLFGS NHMSLGISQV GSQIPSLQDQ 240 NRPSTNMLRL GSAGAAKFEH LIPPSNPSSL QNMPTSAFFM PDAANQGFQQ DHQSHHGHGP 300 YLNKPLQGLM QLPDLQGSTN NPPTSANLFN LGFFSNNSAA SSICTSENAS ASADLPNSGF 360 LSINQFNSGN GGAGQATAMF STDMGDQVGS GLSSLYSTSM QPENISPHMS ATALLQKAAQ 420 MGSTTISNNS SLLRGLGCSS SSGTKSGRPV LSANFSSNFC SGTGGETVRS QMEDDSNLQG 480 LMNSLANGNT SIFGAGHGQD HSNFGGFSES GMTLEQQSNN ANFCNVNEAK LHQNLAANIG 540 GTDKLTLDFL GVGGIVRNIG GGFSQREHGF NISSLDPDVK SLAQAASQRF GSAKLV

Sequence ? help Back to Top

Protein Sequence Length: 596 aa Download sequence

MATASSSTLF FGTRDENQNQ MIQQQSSITP TSSTALTTAP QKKKRNQPGT PNPDAEVIAL  60
SPKTLMATNR FICEVCNKGF QREQNLQLHR RGHNLPWKLK QKTTKEVKRK VYLCPEPTCV  120
HHDPSRALGD LTGIKKHYSR KHGEKKWKCE KCSKRYAVQS DWKAHSKTCG TREYRCDCGT  180
LFSRRDSFIT HRAFCDALAQ ESARHPTKLS TLGSHHLFGS NHMSLGISQV GSQIPSLQDQ  240
NRPSTNMLRL GSAGAAKFEH LIPPSNPSSL QNMPTSAFFM PDAANQGFQQ DHQSHHGHGP  300
YLNKPLQGLM QLPDLQGSTN NPPTSANLFN LGFFSNNSAA SSICTSENAS ASADLPNSGF  360
LSINQFNSGN GGAGQATAMF STDMGDQVGS GLSSLYSTSM QPENISPHMS ATALLQKAAQ  420
MGSTTISNNS SLLRGLGCSS SSGTKSGRPV LSANFSSNFC SGTGGETVRS QMEDDSNLQG  480
LMNSLANGNT SIFGAGHGQD HSNFGGFSES GMTLEQQSNN ANFCNVNEAK LHQNLAANIG  540
GTDKLTLDFL GVGGIVRNIG GGFSQREHGF NISSLDPDVK SLAQAASQRF GSAKLV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02070.1	1e-123	C2H2 family protein