PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022735188.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 543aa MW: 59432.9 Da PI: 7.6612

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022735188.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	28.5	2.7e-09	392	440	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + sk Ka +L + ++Y++sLq XP_022735188.1 392 NSHSLAERVRREKISERMKLLQDLVPGC----SKVTGKALMLDEIINYVQSLQ 440 58***********************9....556***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 543 aa Download sequence
MREQREYKKV SRESEHGGMD IGEKDKHELE KRNENNINYQ APGMSSDWQF GGANLTSPPM 60 SLVPSDNPMA IGSSCASASG VDSFGSNLWE HPSNSQNLVF CDINVQNGAS SLNAIGIGKG 120 GPNSRRSSID RPFDMGWNAS SSMLKGGMFL PHATGILPQS LSQLPADSAF IERAARLSSF 180 NGGNFSDMVN PFGIPESMDI YTRGVGLMQG PQDIFAISGM KSVSGMESQK RKLNATEASR 240 DACLQVENRS TQESPHKNER GSEILVPSKE KAKQGTAGSG NESDKAEFSG GAGGQDEPSA 300 LDGTGGEPSA KGVSSKKRKR IVQDAEDDQA KGGQPPIEAA KDSAENQQKG DQNQTTMINK 360 TTGKQGKKGS QASDPPKEEY IHVRARRGQA TNSHSLAERV RREKISERMK LLQDLVPGCS 420 KVTGKALMLD EIINYVQSLQ RQVEFLSMKL ATVDPGLDFN IEGLLPKDVL HQLWGFLLSF 480 LWVILHYIRL NLDSFKVLFL SWGIMLMLFV ELSVPTSLQW LEDSRSPLRY RMHGRMTSTM 540 LSR

Sequence ? help Back to Top

Protein Sequence Length: 543 aa Download sequence

MREQREYKKV SRESEHGGMD IGEKDKHELE KRNENNINYQ APGMSSDWQF GGANLTSPPM  60
SLVPSDNPMA IGSSCASASG VDSFGSNLWE HPSNSQNLVF CDINVQNGAS SLNAIGIGKG  120
GPNSRRSSID RPFDMGWNAS SSMLKGGMFL PHATGILPQS LSQLPADSAF IERAARLSSF  180
NGGNFSDMVN PFGIPESMDI YTRGVGLMQG PQDIFAISGM KSVSGMESQK RKLNATEASR  240
DACLQVENRS TQESPHKNER GSEILVPSKE KAKQGTAGSG NESDKAEFSG GAGGQDEPSA  300
LDGTGGEPSA KGVSSKKRKR IVQDAEDDQA KGGQPPIEAA KDSAENQQKG DQNQTTMINK  360
TTGKQGKKGS QASDPPKEEY IHVRARRGQA TNSHSLAERV RREKISERMK LLQDLVPGCS  420
KVTGKALMLD EIINYVQSLQ RQVEFLSMKL ATVDPGLDFN IEGLLPKDVL HQLWGFLLSF  480
LWVILHYIRL NLDSFKVLFL SWGIMLMLFV ELSVPTSLQW LEDSRSPLRY RMHGRMTSTM  540
LSR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68920.3	1e-105	bHLH family protein