PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_022735187.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
|
||||||||
Family | bHLH | ||||||||
Protein Properties | Length: 558aa MW: 59669.4 Da PI: 5.8384 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 28.5 | 2.8e-09 | 374 | 422 | 3 | 55 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + sk Ka +L + ++Y++sLq XP_022735187.1 374 NSHSLAERVRREKISERMKLLQDLVPGC----SKVTGKALMLDEIINYVQSLQ 422 58*************************9....556*****************9 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 558 aa Download sequence |
MDIGEKDKHE LEKRNENNIN YQAPGMSSDW QFGGANLTSP PMSLVPSDNP MAIGSSCASA 60 SGVDSFGSNL WEHPSNSQNL VFCDINVQNG ASSLNAIGIG KGGPNSRRSS IDRPFDMGWN 120 ASSSMLKGGM FLPHATGILP QSLSQLPADS AFIERAARLS SFNGGNFSDM VNPFGIPESM 180 DIYTRGVGLM QGPQDIFAIS GMKSVSGMES QKRKLNATEA SRDACLQVEN RSTQESPHKN 240 ERGSEILVPS KEKAKQGTAG SGNESDKAEF SGGAGGQDEP SALDGTGGEP SAKGVSSKKR 300 KRIVQDAEDD QAKGGQPPIE AAKDSAENQQ KGDQNQTTMI NKTTGKQGKK GSQASDPPKE 360 EYIHVRARRG QATNSHSLAE RVRREKISER MKLLQDLVPG CSKVTGKALM LDEIINYVQS 420 LQRQVEFLSM KLATVDPGLD FNIEGLLPKD IIHLRAGPSS TLGFSPEFSV GYPSLHPTQP 480 GLVQGALPVM GNNADVIRGT LSSHFTPMAG GFKEPTQVSN AWEDDLHNVV QMNYGANAPS 540 DNQEVNGSLP SDHTKVEL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G68920.3 | 1e-127 | bHLH family protein |