PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022735185.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 558aa MW: 59669.4 Da PI: 5.8384

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022735185.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	28.5	2.8e-09	374	422	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + sk Ka +L + ++Y++sLq XP_022735185.1 374 NSHSLAERVRREKISERMKLLQDLVPGC----SKVTGKALMLDEIINYVQSLQ 422 58***********************9....556***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 558 aa Download sequence
MDIGEKDKHE LEKRNENNIN YQAPGMSSDW QFGGANLTSP PMSLVPSDNP MAIGSSCASA 60 SGVDSFGSNL WEHPSNSQNL VFCDINVQNG ASSLNAIGIG KGGPNSRRSS IDRPFDMGWN 120 ASSSMLKGGM FLPHATGILP QSLSQLPADS AFIERAARLS SFNGGNFSDM VNPFGIPESM 180 DIYTRGVGLM QGPQDIFAIS GMKSVSGMES QKRKLNATEA SRDACLQVEN RSTQESPHKN 240 ERGSEILVPS KEKAKQGTAG SGNESDKAEF SGGAGGQDEP SALDGTGGEP SAKGVSSKKR 300 KRIVQDAEDD QAKGGQPPIE AAKDSAENQQ KGDQNQTTMI NKTTGKQGKK GSQASDPPKE 360 EYIHVRARRG QATNSHSLAE RVRREKISER MKLLQDLVPG CSKVTGKALM LDEIINYVQS 420 LQRQVEFLSM KLATVDPGLD FNIEGLLPKD IIHLRAGPSS TLGFSPEFSV GYPSLHPTQP 480 GLVQGALPVM GNNADVIRGT LSSHFTPMAG GFKEPTQVSN AWEDDLHNVV QMNYGANAPS 540 DNQEVNGSLP SDHTKVEL

Sequence ? help Back to Top

Protein Sequence Length: 558 aa Download sequence

MDIGEKDKHE LEKRNENNIN YQAPGMSSDW QFGGANLTSP PMSLVPSDNP MAIGSSCASA  60
SGVDSFGSNL WEHPSNSQNL VFCDINVQNG ASSLNAIGIG KGGPNSRRSS IDRPFDMGWN  120
ASSSMLKGGM FLPHATGILP QSLSQLPADS AFIERAARLS SFNGGNFSDM VNPFGIPESM  180
DIYTRGVGLM QGPQDIFAIS GMKSVSGMES QKRKLNATEA SRDACLQVEN RSTQESPHKN  240
ERGSEILVPS KEKAKQGTAG SGNESDKAEF SGGAGGQDEP SALDGTGGEP SAKGVSSKKR  300
KRIVQDAEDD QAKGGQPPIE AAKDSAENQQ KGDQNQTTMI NKTTGKQGKK GSQASDPPKE  360
EYIHVRARRG QATNSHSLAE RVRREKISER MKLLQDLVPG CSKVTGKALM LDEIINYVQS  420
LQRQVEFLSM KLATVDPGLD FNIEGLLPKD IIHLRAGPSS TLGFSPEFSV GYPSLHPTQP  480
GLVQGALPVM GNNADVIRGT LSSHFTPMAG GFKEPTQVSN AWEDDLHNVV QMNYGANAPS  540
DNQEVNGSLP SDHTKVEL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68920.3	1e-127	bHLH family protein