PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022734931.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 211aa MW: 24927 Da PI: 10.2393 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 92.9 | 1.5e-29 | 36 | 86 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krie + rqvtfskRrng+lKKA+ELSvLCdaevaviifs++g++ye+ss XP_022734931.1 36 KRIEKATSRQVTFSKRRNGLLKKAYELSVLCDAEVAVIIFSQKGRVYEFSS 86 79***********************************************96 PP | |||||||
2 | K-box | 70.8 | 4.3e-24 | 109 | 198 | 9 | 98 |
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 e+ + +l+ e++++ ++ie L+ +qR+llG++L+s+s++eL ++e+qLe+sl++iR++K +l++eq+e+l+ ke+ l+een +L++k+ XP_022734931.1 109 EMERYTRQLRLEAENMARKIELLEVSQRKLLGQSLGSCSVEELLEVESQLERSLRNIRARKGHLFKEQMEQLKAKERFLREENAKLSAKV 198 66777889999****************************************************************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 211 aa Download sequence |
MNIYAYLPLY LGLTRGIFEI FFFLNLEMVR GKIQMKRIEK ATSRQVTFSK RRNGLLKKAY 60 ELSVLCDAEV AVIIFSQKGR VYEFSSSDMQ KTIERYHKYI KEAQTDKPEM ERYTRQLRLE 120 AENMARKIEL LEVSQRKLLG QSLGSCSVEE LLEVESQLER SLRNIRARKG HLFKEQMEQL 180 KAKERFLREE NAKLSAKVIH HSKIFTARHE S |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G62165.3 | 4e-63 | MIKC_MADS family protein |